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arXiv:2512.04587

Supramolecular approach-based intermolecular interaction energy calculations using quantum phase estimation algorithm

Yuhei Tachi, Akihiko Arakawa, Taisei Osawa, Masayoshi Terabe, Kenji Sugisaki

quant-phphysics.chem-phSubmitted Dec 4, 2025• Announced Dec 5, 2025• 0 citations
v1 · Dec 4, 2025v2 · Dec 26, 2025
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Abstract

Accurate computation of non-covalent, intermolecular interaction energies is important to understand various chemical phenomena, and quantum computers are anticipated to accelerate it. Although the state-of-the-art quantum computers are still noisy and intermediate-scale ones, development of theoretical frameworks those are expected to work on a fault-tolerant quantum computer is an urgent issue. In this work, we explore resource-efficient implementation of the quantum phase estimation-based complete active space configuration interaction (QPE-CASCI) calculations, with the aid of the second-order Møller--Plesset perturbation theory (MP2)-based active space selection with Boys localized orbitals. We performed numerical simulations of QPE for the supramolecular approach-based intermolecular interaction energy calculations of the hydrogen-bonded water dimer, using 6 system and 6 ancilla qubits. With the aid of algorithmic error mitigation, the QPE-CASCI simulations achieved interaction energy predictions with an error of 0.02 kcal mol$^{-1}$ relative to the CASCI result, demonstrating the accuracy and efficiency of the proposed methodology. Preliminary results on quantum circuit compression for QPE are also presented to reduce the number of two-qubit gates and depth.

Comments
13 pages, 12 figures

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Abstract We present the first quantum-centric simulations of noncovalent interactions using a supramolecular approach. We simulate the potential energy surfaces (PES) of the water and methane dimers, featuring hydrophilic and hydrophobic interactions, respectively, with a sample-based quantum diagonalization (SQD) approach. Our simulations on quantum processors, using 27- and 36-qubit circuits, are in remarkable agreement with classical methods, deviating from complete active space configuration interaction (CASCI) and coupled-cluster singles, doubles, and perturbative triples (CCSD(T)) within 1 kcal/mol in the equilibrium regions of the PES. Finally, we test the capacity limits of the quantum methods for capturing hydrophobic interactions with an experiment on 54 qubits. These results mark significant progress in the application of quantum computing to chemical problems, paving the way for more accurate modeling of noncovalent interactions in complex systems critical to the biological, chemical and pharmaceutical sciences.
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Quantum computers are expected to perform full-configuration interaction calculations with less computational resources compared to classical ones, thanks to the use of quantum phase estimation (QPE) algorithms. However, only a limited number of QPE-based quantum chemical calculations have been reported even for numerical simulations on a classical computer, and the practical workflow for the QPE computation has not yet been established. In this paper, we report the QPE simulations of the electronic ground and the π-π* excited singlet state of benzene and its chloro- and nitro-derivatives as the representative industrially important systems, with the aid of GPGPU acceleration of quantum circuit simulations. We adopted the pseudo-natural orbitals obtained from the MP2 calculation as the basis for the wave function expansion, the CISD calculation within the active space to find the main electronic configurations to be included in the input wave function of the excited state, and the technique to reduce the truncation error of the calculated total energies. The proposed computational workflow is easily applicable to other molecules and can be a standard approach for performing QPE-based quantum chemical calculations of practical molecules.
We compare several quantum phase estimation (QPE) protocols intended for early fault-tolerant quantum computers (EFTQCs) in the context of models of their implementations on a surface code architecture. We estimate the logical and physical resources required to use these protocols to calculate the ground state energy of molecular hydrogen in a minimal basis with error below 10−310^{-3}10−3 atomic units in the presence of depolarizing logical errors. Accounting for the overhead of rotation synthesis and magic state distillation, we find that the total TTT-gate counts do not vary significantly among the EFT QPE protocols at fixed state overlap. In addition to reducing the number of ancilla qubits and circuit depth, the noise robustness of the EFT protocols can be leveraged to reduce resource requirements below those of textbook QPE, realizing approximately a 300-fold reduction in computational volume in some cases. Even so, our estimates are well beyond the scale of existing early fault-tolerance demonstrations.