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Quantum Algorithms for Chemistry and Differential Equations

Philipp Schleich

Published Oct 1, 2025• 0 citations
OpenAlex

Abstract

Quantum computers were first proposed to perform simulation -- in particular, quantum simulation. The premise is that such computers can simulate quantum dynamics exponentially faster than a classical computer. Some of the early proposals of practical applications of quantum computers come from quantum chemistry. Algorithms for more general systems, described by ordinary and partial differential equations, emerged later on. This thesis grounds on an extensive amount of prior research and proposes a set of improvements as well as new algorithms or algorithmic tools, focusing on applications from quantum chemistry and differential equations.First, we propose a technique relating to finding ground-states for electronic systems via the variational quantum eigensolver. The presented method enables solving the problem on early quantum hardware by a partitioning of the computational problem into smaller problems, using only classical resources to perform the partitioning. Next, the thesis considers simulation problems from chemistry in a more general sense. Following the idea that dynamical simulation of many chemical systems is efficient, whereas preparing ground-states is a `hard' problem, our computational framework leverages simulation routines to prepare molecular states as an input to a computation, relying only on `hard' input states for small problem instances. The preparation relies on dynamical scattering of initial fragments supported by a trap potential, allowing to estimate the success probability for certain bonds. A weak measurement scheme enables preparation of molecular states. Furthermore, this dissertation investigates quantum algorithms for differential equations. More specifically, the the Carleman linearization approach is considered to solve nonlinear differential equations. This entails bounding the Carleman truncation error, re-scaling of the solution to avoid an exponentially vanishing success probability, and discussing higher-order discretization. Moreover, this thesis introduced a penalty-based method to enforce constraints on the solution of differential equations, with inspiration from complex absorbing potentials and the quantum Zeno effect. We bound the approximation errors and embed the penalty method into an efficient quantum algorithm, with computational overhead only logarithmic in the penalty's strength. Efficiency is enabled by an interaction-picture approach with fast-forwardable constraint projections.

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Quantum chemistry models atoms and molecules using quantum mechanics, with the electronic structure problem at its core. This problem, which determines the energy and properties of electrons in a molecule, is exponentially hard to solve exactly on classical computers. To approximate solutions, effective models introduce layers of simplifications. However, these approximations can fail for strongly correlated systems, necessitating alternative approaches. Quantum computers, capable of processing quantum information natively, offer a promising path to simulate molecular systems beyond classical reach, with potential applications in catalysis, materials science, and photochemistry. Despite rapid advancements in quantum hardware, practical quantum computations remain challenging due to limited resources. This thesis optimizes quantum resource usage in computational chemistry, introducing novel embedding techniques and exploring applications beyond ground-state energies. Chapter 1 establishes the foundation by reviewing quantum chemistry methods, from Hartree-Fock and Density Functional Theory (DFT) to active space approaches. It also provides an introduction to quantum computing for chemistry, focusing on near-term algorithms. The following chapters present novel methods aimed at reducing quantum resource requirements and tackling problems classical methods struggle with. Chapter 2 introduces a technique to reduce the $\lambda$-norm of the electronic structure Hamiltonian, a key measure of quantum resource demand. By transforming molecular orbitals, this method enhances sampling efficiency in Noisy Intermediate-Scale Quantum (NISQ) algorithms and reduces runtime in Fault-Tolerant Quantum Computing (FTQC). Localized orbitals outperform canonical ones, and an orbital-optimization scheme is proposed to minimize the $\lambda$-norm. Benchmarks on hydrogen chains, FeMoco, and Ruthenium complexes demonstrate its effectiveness. Chapter 3 presents the FragPT2 framework for simulating large systems with multiple interacting fragments. This method embeds each fragment in the mean field of others and applies multi-reference perturbation theory to capture inter-fragment correlations such as dispersion and charge transfer efficiently. The approach reduces computational overhead and enables scalable simulations, as shown in applications to \ce{N2} dimers, aromatic dimers, and butadiene. Chapter 4 focuses on photochemical systems, where multiple electronic states must be treated equally. The state-averaged orbital-optimized variational quantum eigensolver (SAOOVQE) is extended with analytical energy gradients and non-adiabatic couplings, enabling geometry optimizations and simulations of non-adiabatic dynamics on quantum hardware. This is demonstrated by locating the conical intersection in formaldimine, highlighting SAOOVQE’s potential for studying photoisomerization in biomolecules. Building on this, Chapter 5 develops a quantum algorithm to detect conical intersections, where the Born-Oppenheimer approximation breaks down. These intersections are characterized by a discrete Berry phase (0 or $\pi$), representing their topological nature. The algorithm extracts this phase as a single bit of information, ensuring resilience to noise. Analytical proof and numerical validation using a toy molecular model illustrate its effectiveness for studying light-perception biochemistry and related photochemical processes. Finally, Chapter 6 explores machine learning density functionals trained on noisy quantum data. While DFT is computationally efficient, its accuracy depends on approximated exchange-correlation functionals. This work proposes a neural network-based approach to learn the exact functional from quantum data, showing that training on noisy outputs from NISQ devices can mitigate sampling errors. Applications to the Fermi-Hubbard model and other systems demonstrate its potential to generalize and provide accurate results under noise. This thesis advances quantum computational chemistry by optimizing quantum resource usage, developing new embedding strategies, and expanding the scope of quantum simulations beyond ground-state properties. These contributions pave the way for practical quantum algorithms that could revolutionize molecular simulations in the near future.

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Simulations of chemical dynamics are a powerful means for understanding chemistry. However, classical computers struggle to simulate many chemical processes, especially non-adiabatic ones, where the Born-Oppenheimer approximation breaks down. Quantum computers could simulate quantum-chemical dynamics more efficiently than classical computers, but there is currently no complete quantum algorithm for calculating dynamical observables to within a known error. Here, we develop an efficient, end-to-end quantum algorithm for simulating chemical dynamics that avoids all uncontrolled approximations (including the Born-Oppenheimer approximation) and whose error is bounded subject to mild assumptions. To do so, we treat the nuclei and the electrons on an equal footing and simulate the full molecular wavefunction on a momentum-space grid in first quantization, including all algorithmic steps: initial-state preparation, time evolution using qubitization, and measurement of chemical observables such as reaction yields and rates. Our work gives the first algorithm for quantum simulation of chemistry whose end-to-end complexity achieves sublinear scaling in the size of the grid. We achieve this by developing an exponentially faster method for initial-state-preparation. Photochemistry is a likely early application of our algorithm and we estimate resources required for end-to-end simulations of non-adiabatic dynamics of atmospherically important molecules. Classically intractable photochemical computations could be performed using resources comparable to those required for other chemical applications of quantum computing.

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•Jan 1, 2018•35 citations
Quantum computers were first proposed to perform simulation -- in particular, quantum simulation. The premise is that such computers can simulate quantum dynamics exponentially faster than a classical computer. Some of the early proposals of practical applications of quantum computers come from quantum chemistry. Algorithms for more general systems, described by ordinary and partial differential equations, emerged later on. This thesis grounds on an extensive amount of prior research and proposes a set of improvements as well as new algorithms or algorithmic tools, focusing on applications from quantum chemistry and differential equations.First, we propose a technique relating to finding ground-states for electronic systems via the variational quantum eigensolver. The presented method enables solving the problem on early quantum hardware by a partitioning of the computational problem into smaller problems, using only classical resources to perform the partitioning. Next, the thesis considers simulation problems from chemistry in a more general sense. Following the idea that dynamical simulation of many chemical systems is efficient, whereas preparing ground-states is a hard' problem, our computational framework leverages simulation routines to prepare molecular states as an input to a computation, relying only on hard' input states for small problem instances. The preparation relies on dynamical scattering of initial fragments supported by a trap potential, allowing to estimate the success probability for certain bonds. A weak measurement scheme enables preparation of molecular states. Furthermore, this dissertation investigates quantum algorithms for differential equations. More specifically, the the Carleman linearization approach is considered to solve nonlinear differential equations. This entails bounding the Carleman truncation error, re-scaling of the solution to avoid an exponentially vanishing success probability, and discussing higher-order discretization. Moreover, this thesis introduced a penalty-based method to enforce constraints on the solution of differential equations, with inspiration from complex absorbing potentials and the quantum Zeno effect. We bound the approximation errors and embed the penalty method into an efficient quantum algorithm, with computational overhead only logarithmic in the penalty's strength. Efficiency is enabled by an interaction-picture approach with fast-forwardable constraint projections.
Quantum chemistry models atoms and molecules using quantum mechanics, with the electronic structure problem at its core. This problem, which determines the energy and properties of electrons in a molecule, is exponentially hard to solve exactly on classical computers. To approximate solutions, effective models introduce layers of simplifications. However, these approximations can fail for strongly correlated systems, necessitating alternative approaches. Quantum computers, capable of processing quantum information natively, offer a promising path to simulate molecular systems beyond classical reach, with potential applications in catalysis, materials science, and photochemistry. Despite rapid advancements in quantum hardware, practical quantum computations remain challenging due to limited resources. This thesis optimizes quantum resource usage in computational chemistry, introducing novel embedding techniques and exploring applications beyond ground-state energies. Chapter 1 establishes the foundation by reviewing quantum chemistry methods, from Hartree-Fock and Density Functional Theory (DFT) to active space approaches. It also provides an introduction to quantum computing for chemistry, focusing on near-term algorithms. The following chapters present novel methods aimed at reducing quantum resource requirements and tackling problems classical methods struggle with. Chapter 2 introduces a technique to reduce the λ\lambdaλ-norm of the electronic structure Hamiltonian, a key measure of quantum resource demand. By transforming molecular orbitals, this method enhances sampling efficiency in Noisy Intermediate-Scale Quantum (NISQ) algorithms and reduces runtime in Fault-Tolerant Quantum Computing (FTQC). Localized orbitals outperform canonical ones, and an orbital-optimization scheme is proposed to minimize the λ\lambdaλ-norm. Benchmarks on hydrogen chains, FeMoco, and Ruthenium complexes demonstrate its effectiveness. Chapter 3 presents the FragPT2 framework for simulating large systems with multiple interacting fragments. This method embeds each fragment in the mean field of others and applies multi-reference perturbation theory to capture inter-fragment correlations such as dispersion and charge transfer efficiently. The approach reduces computational overhead and enables scalable simulations, as shown in applications to \ce{N2} dimers, aromatic dimers, and butadiene. Chapter 4 focuses on photochemical systems, where multiple electronic states must be treated equally. The state-averaged orbital-optimized variational quantum eigensolver (SAOOVQE) is extended with analytical energy gradients and non-adiabatic couplings, enabling geometry optimizations and simulations of non-adiabatic dynamics on quantum hardware. This is demonstrated by locating the conical intersection in formaldimine, highlighting SAOOVQE’s potential for studying photoisomerization in biomolecules. Building on this, Chapter 5 develops a quantum algorithm to detect conical intersections, where the Born-Oppenheimer approximation breaks down. These intersections are characterized by a discrete Berry phase (0 or π\piπ), representing their topological nature. The algorithm extracts this phase as a single bit of information, ensuring resilience to noise. Analytical proof and numerical validation using a toy molecular model illustrate its effectiveness for studying light-perception biochemistry and related photochemical processes. Finally, Chapter 6 explores machine learning density functionals trained on noisy quantum data. While DFT is computationally efficient, its accuracy depends on approximated exchange-correlation functionals. This work proposes a neural network-based approach to learn the exact functional from quantum data, showing that training on noisy outputs from NISQ devices can mitigate sampling errors. Applications to the Fermi-Hubbard model and other systems demonstrate its potential to generalize and provide accurate results under noise. This thesis advances quantum computational chemistry by optimizing quantum resource usage, developing new embedding strategies, and expanding the scope of quantum simulations beyond ground-state properties. These contributions pave the way for practical quantum algorithms that could revolutionize molecular simulations in the near future.
The design of new materials and chemicals derived entirely from computation has long been a goal of computational chemistry, and the governing equation whose solution would permit this dream is known. Unfortunately, the exact solution to this equation has been far too expensive and clever approximations fail in critical situations. Quantum computers offer a novel solution to this problem. In this work, we develop not only new algorithms to use quantum computers to study hard problems in chemistry, but also explore how such algorithms can help us to better understand and improve our traditional approaches.\n\nIn particular, we first introduce a new method, the variational quantum eigensolver, which is designed to maximally utilize the quantum resources available in a device to solve chemical problems. We apply this method in a real quantum photonic device in the lab to study the dissociation of the helium hydride (HeH+^{+}+) molecule. We also enhance this methodology with architecture specific optimizations on ion trap computers and show how linear-scaling techniques from traditional quantum chemistry can be used to improve the outlook of similar algorithms on quantum computers.\n\nWe then show how studying quantum algorithms such as these can be used to understand and enhance the development of classical algorithms. In particular we use a tool from adiabatic quantum computation, Feynman's Clock, to develop a new discrete time variational principle and further establish a connection between real-time quantum dynamics and ground state eigenvalue problems. We use these tools to develop two novel parallel-in-time quantum algorithms that outperform competitive algorithms as well as offer new insights into the connection between the fermion sign problem of ground states and the dynamical sign problem of quantum dynamics.\n\nFinally we use insights gained in the study of quantum circuits to explore a general notion of sparsity in many-body quantum systems. In particular we use developments from the field of compressed sensing to find compact representations of ground states. As an application we study electronic systems and find solutions dramatically more compact than traditional configuration interaction expansions, offering hope to extend this methodology to challenging systems in chemical and material design.
Simulations of chemical dynamics are a powerful means for understanding chemistry. However, classical computers struggle to simulate many chemical processes, especially non-adiabatic ones, where the Born-Oppenheimer approximation breaks down. Quantum computers could simulate quantum-chemical dynamics more efficiently than classical computers, but there is currently no complete quantum algorithm for calculating dynamical observables to within a known error. Here, we develop an efficient, end-to-end quantum algorithm for simulating chemical dynamics that avoids all uncontrolled approximations (including the Born-Oppenheimer approximation) and whose error is bounded subject to mild assumptions. To do so, we treat the nuclei and the electrons on an equal footing and simulate the full molecular wavefunction on a momentum-space grid in first quantization, including all algorithmic steps: initial-state preparation, time evolution using qubitization, and measurement of chemical observables such as reaction yields and rates. Our work gives the first algorithm for quantum simulation of chemistry whose end-to-end complexity achieves sublinear scaling in the size of the grid. We achieve this by developing an exponentially faster method for initial-state-preparation. Photochemistry is a likely early application of our algorithm and we estimate resources required for end-to-end simulations of non-adiabatic dynamics of atmospherically important molecules. Classically intractable photochemical computations could be performed using resources comparable to those required for other chemical applications of quantum computing.
Computer simulation is central to understanding the behaviour of matter. Yet, more than a century after the development of quantum theory, first-principles simulation of chemistry remains a daunting challenge, owing to the exponential growth in memory required to represent interacting quantum particles such as electrons in molecules. Quantum computing offers, in principle, a fundamentally more efficient paradigm for simulating quantum systems, with quantum chemistry often cited as a flagship application. However, many quantum algorithms face intrinsic limitations, and any genuine quantum advantage must surpass the strong baseline set by decades of progress in classical algorithms and hardware. While classical methods often suffice for simulating weakly correlated systems, systems with many strongly correlated electrons remain a challenge for both classical and quantum approaches. In this thesis, we develop quantum algorithms for solving the time-independent Schrödinger equation, with a focus on molecular systems with strongly correlated electrons. We introduce a framework for identifying a compact set of states that parametrise the many-body wavefunction by capturing the correlation due to spin coupling between localised electrons. This representation requires very few variational parameters but incurs a very high memory cost on classical computers. To overcome this, we design quantum circuits that efficiently prepare such states by exploiting their symmetry, encoding the dominant entanglement structure of electronic wavefunctions into the initial qubit states. Through theoretical analysis and classical simulations of quantum computers, we show that this substantially reduces the quantum resources required to accurately compute ground- and excitedstate properties. Finally, we develop an approach for approximating the optimal ansatz within the variational quantum eigensolver, an algorithm designed for near-term quantum devices. Our method constructs wavefunctions from products of symmetrypreserving unitary operators and couples discrete and continuous optimisation to yield highly compact representations of strongly correlated electrons using shallow quantum circuits. Together, these results establish complementary directions for embedding problemspecific structure into quantum simulation algorithms, advancing the practical simulation of strongly correlated electrons.
This thesis describes quantum algorithms for Hamiltonian simulation, ordinary differential equations (ODEs), and partial differential equations (PDEs). Product formulas are used to simulate Hamiltonians which can be expressed as a sum of terms which can each be simulated individually. By simulating each of these terms in sequence, the net effect approximately simulates the total Hamiltonian. We find that the error of product formulas can be improved by randomizing over the order in which the Hamiltonian terms are simulated. We prove that this approach is asymptotically better than ordinary product formulas and present numerical comparisons for small numbers of qubits. The ODE algorithm applies to the initial value problem for time-independent first order linear ODEs. We approximate the propagator of the ODE by a truncated Taylor series, and we encode the initial value problem in a large linear system. We solve this linear system with a quantum linear system algorithm (QLSA) whose output we perform a post-selective measurement on. The resulting state encodes the solution to the initial value problem. We prove that our algorithm is asymptotically optimal with respect to several system parameters. The PDE algorithms apply the finite difference method (FDM) to Poisson's equation, the wave equation, and the Klein-Gordon equation. We use high order FDM approximations of the Laplacian operator to develop linear systems for Poisson's equation in cubic volumes under periodic, Neumann, and Dirichlet boundary conditions. Using QLSAs, we output states encoding solutions to Poisson's equation. We prove that our algorithm is exponentially faster with respect to the spatial dimension than analogous classical algorithms. We also consider how high order Laplacian approximations can be used for simulating the wave and Klein-Gordon equations. We consider under what conditions it suffices to use Hamiltonian simulation for time evolution, and we propose an algorithm for these cases that uses QLSAs for state preparation and post-processing.
Quantum computation appears to offer significant advantages over classical computation and this has generated a tremendous interest in the field. In this thesis we study the application of quantum computers to computational problems in science and engineering, and to combinatorial optimization problems. We outline the results below. Algorithms for scientific computing require modules, i.e., building blocks, implementing elementary numerical functions that have well-controlled numerical error, are uniformly scalable and reversible, and that can be implemented efficiently. We derive quantum algorithms and circuits for computing square roots, logarithms, and arbitrary fractional powers, and derive worst-case error and cost bounds. We describe a modular approach to quantum algorithm design as a first step towards numerical standards and mathematical libraries for quantum scientific computing. A fundamental but computationally hard problem in physics is to solve the time-independent Schrödinger equation. This is accomplished by computing the eigenvalues of the corresponding Hamiltonian operator. The eigenvalues describe the different energy levels of a system. The cost of classical deterministic algorithms computing these eigenvalues grows exponentially with the number of system degrees of freedom. The number of degrees of freedom is typically proportional to the number of particles in a physical system. We show an efficient quantum algorithm for approximating a constant number of low-order eigenvalues of a Hamiltonian using a perturbation approach. We apply this algorithm to a special case of the Schrödinger equation and show that our algorithm succeeds with high probability, and has cost that scales polynomially with the number of degrees of freedom and the reciprocal of the desired accuracy. This improves and extends earlier results on quantum algorithms for estimating the ground state energy. We consider the simulation of quantum mechanical systems on a quantum computer. We show a novel divide and conquer approach for Hamiltonian simulation. Using the Hamiltonian structure, we can obtain faster simulation algorithms. Considering a sum of Hamiltonians we split them into groups, simulate each group separately, and combine the partial results. Simulation is customized to take advantage of the properties of each group, and hence yield refined bounds to the overall simulation cost. We illustrate our results using the electronic structure problem of quantum chemistry, where we obtain significantly improved cost estimates under mild assumptions. We turn to combinatorial optimization problems. An important open question is whether quantum computers provide advantages for the approximation of classically hard combinatorial problems. A promising recently proposed approach of Farhi et al. is the Quantum Approximate Optimization Algorithm (QAOA). We study the application of QAOA to the Maximum Cut problem, and derive analytic performance bounds for the lowest circuit-depth realization, for both general and special classes of graphs. Along the way, we develop a general procedure for analyzing the performance of QAOA for other problems, and show an example demonstrating the difficulty of obtaining similar results for greater depth. We show a generalization of QAOA and its application to wider classes of combinatorial optimization problems, in particular, problems with feasibility constraints. We introduce the Quantum Alternating Operator Ansatz, which utilizes more general unitary operators than the original QAOA proposal. Our framework facilitates low-resource implementations for many applications which may be particularly suitable for early quantum computers. We specify design criteria, and develop a set of results and tools for mapping diverse problems to explicit quantum circuits. We derive constructions for several important prototypical problems including Maximum Independent Set, Graph Coloring, and the Traveling Salesman problem, and show appealing resource cost estimates for their implementations.