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International Symposium on Applied Informatics and Related Areas (AIS)

Quantum Machine Learning Algorithms for Genome Disease Diagnosis

Al KhaN, Elnura Usupova

Published Nov 13, 2025• 0 citations
Publisher

Abstract

The rapid advancements in genomics and the availability of large-scale genetic datasets have revolutionized our understanding of genetic diseases. However, the complexity and high dimensionality of genomic data pose significant computational challenges for classical machine learning (ML) algorithms. Quantum machine learning (QML), an emerging interdisciplinary field that combines quantum computing with ML techniques, offers a promising solution to address these challenges. This paper explores the application of QML algorithms for diagnosing genetic diseases by leveraging the unique properties of quantum computing, such as superposition, entanglement, and quantum parallelism. A novel hybrid quantum-classical approach is proposed to enhance the accuracy and efficiency of disease diagnosis using genomic datasets. The methodology involves encoding genetic data into quantum states, applying quantum-enhanced feature selection and classification algorithms, and validating the results on publicly available datasets, such as the UK Biobank and the Cancer Genome Atlas (TCGA). Experimental results demonstrate that the proposed QML framework achieves higher classification accuracy and faster computation times compared to classical counterparts. Equations, tables, and charts are used to illustrate the effectiveness of the approach. This research highlights the transformative potential of QML in precision medicine and lays the groundwork for future investigations into quantum-enabled healthcare solutions.

DOI
10.12700/ais.2025.005

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The rapid advancements in genomics and the availability of large-scale genetic datasets have revolutionized our understanding of genetic diseases. However, the complexity and high dimensionality of genomic data pose significant computational challenges for classical machine learning (ML) algorithms. Quantum machine learning (QML), an emerging interdisciplinary field that combines quantum computing with ML techniques, offers a promising solution to address these challenges. This paper explores the application of QML algorithms for diagnosing genetic diseases by leveraging the unique properties of quantum computing, such as superposition, entanglement, and quantum parallelism. A novel hybrid quantum-classical approach is proposed to enhance the accuracy and efficiency of disease diagnosis using genomic datasets. The methodology involves encoding genetic data into quantum states, applying quantum-enhanced feature selection and classification algorithms, and validating the results on publicly available datasets, such as the UK Biobank and the Cancer Genome Atlas (TCGA). Experimental results demonstrate that the proposed QML framework achieves higher classification accuracy and faster computation times compared to classical counterparts. Equations, tables, and charts are used to illustrate the effectiveness of the approach. This research highlights the transformative potential of QML in precision medicine and lays the groundwork for future investigations into quantum-enabled healthcare solutions.
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The merger between Quantum Computing (QC) and Machine Learning (ML) will enable health analytics to be experienced in a way never seen before with unmatched efficiency and power. Conventional methods of healthcare data processing have not been able to work with very big and complex data sets that are related to medical imaging, genomics, and real-time tracking of the patients. Quantum Machine Learning (QML) has an advantage, as it uses new algorithms to work with such multidimensional data with much better accuracy, speed, and predictive power. This paper presents the essential contribution of QML to healthcare analytics, such as supporting diagnosis, to personalized medicine and predictive modelling. This quantum enhanced deep learning models will achieve what is currently being done at the larger scale in the field of medicine at a faster rate a thousand times, through earlier detection of diseases like cancer, Alzheimer disease and heart diseases. In drug discovery, quantum algorithms decrease the simulation of molecular interactions down to the atomic scale, which saves a substantial amount of time and cost of research. Security is, nevertheless, a massive issue since future developments in quantum theory will generate quantum-wise systems that will bring misfortunes to conventional encryption solutions adopted within healthcare systems. The implications of post-quantum cryptography that ensures the strong data privacy and safe patient records in quantum-powered ecosystem are discussed. Scalability obstacles, systems creation, and integration with traditional ML models, however, exist. Real-world applications and future perspectives on the quantum-enhanced healthcare analytics upon which plans have already been laid are presented. Looking ahead, QML will build in the transition of healthcare systems toward analytics frameworks faster, much more precise, and enhanced secure, heralding in the day of precision medicine early diagnostics and a new age for healthcare innovation.
Abstract The digitization of healthcare presents numerous challenges, including the complexity of biological systems, vast data generation, and the need for personalized treatment plans. Traditional computational methods often fall short, leading to delayed and sometimes ineffective diagnoses and treatments. Quantum Computing (QC) and Quantum Machine Learning (QML) offer transformative advancements with the potential to revolutionize medicine by leveraging quantum mechanics principles. This paper summarizes areas where QC promises unprecedented computational power, enabling faster, more accurate diagnostics, personalized treatments, and enhanced drug discovery processes. However, integrating quantum technologies into precision medicine also presents challenges, including errors in algorithms and high costs. We show that mathematically-based techniques for specifying, developing, and verifying software (formal methods) can enhance the reliability and correctness of QC. By providing a rigorous mathematical framework, formal methods help to specify, develop, and verify systems with high precision. In genomic data analysis, formal specification languages can precisely (1) define the behavior and properties of quantum algorithms designed to identify genetic markers associated with diseases. Model checking tools can systematically explore all possible states of the algorithm to (2) ensure it behaves correctly under all conditions, while theorem proving techniques provide mathematical (3) proof that the algorithm meets its specified properties, ensuring accuracy and reliability. Additionally, formal optimization techniques can (4) enhance the efficiency and performance of quantum algorithms by reducing resource usage, such as the number of qubits and gate operations. Therefore, we posit that formal methods can significantly contribute to enabling QC to realize its full potential as a game changer in precision medicine.
The advent of quantum computing has opened new possibilities in data science, offering unique capabilities for addressing complex, data-intensive problems. Traditional machine learning algorithms often face challenges in high-dimensional or limited-quality datasets, which are common in healthcare. Quantum Machine Learning leverages quantum properties, such as superposition and entanglement, to enhance pattern recognition and classification, potentially surpassing classical approaches. This paper explores QML's application in healthcare, focusing on quantum kernel methods and hybrid quantum-classical networks for heart disease prediction and COVID-19 detection, assessing their feasibility and performance.