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Nature Communications

Super-resolution microscopy enabled by high-efficiency surface-migration emission depletion

Rui Pu, Qiuqiang Zhan, Xingyun Peng, Siying Liu, Xin Guo, Liangliang Liang, Xian Qin, Ziqing Zhao, Xiaogang Liu

Published Nov 4, 2022• 48 citations
Publisher

Abstract

Abstract Nonlinear depletion of fluorescence states by stimulated emission constitutes the basis of stimulated emission depletion (STED) microscopy. Despite significant efforts over the past decade, achieving super-resolution at low saturation intensities by STED remains a major technical challenge. By harnessing the surface quenching effect in NaGdF 4 :Yb/Tm nanocrystals, we report here high-efficiency emission depletion through surface migration. Using a dual-beam, continuous-wave laser manipulation scheme (975-nm excitation and 730-nm de-excitation), we achieved an emission depletion efficiency of over 95% and a low saturation intensity of 18.3 kW cm −2 . Emission depletion by surface migration through gadolinium sublattices enables super-resolution imaging with sub-20 nm lateral resolution. Our approach circumvents the fundamental limitation of high-intensity STED microscopy, providing autofluorescence-free, re-excitation-background-free imaging with a saturation intensity over three orders of magnitude lower than conventional fluorophores. We also demonstrated super-resolution imaging of actin filaments in Hela cells labeled with 8-nm nanoparticles. Combined with the highly photostable lanthanide luminescence, surface-migration emission depletion (SMED) could provide a powerful mechanism for low-power, super-resolution imaging or biological tracking as well as super-resolved optical sensing/writing and lithography.

DOI
10.1038/s41467-022-33726-7

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Journal of Physics D Applied Physics•Jul 15, 2019•0 citations
Abstract Nonlinear depletion of fluorescence states by stimulated emission constitutes the basis of stimulated emission depletion (STED) microscopy. Despite significant efforts over the past decade, achieving super-resolution at low saturation intensities by STED remains a major technical challenge. By harnessing the surface quenching effect in NaGdF 4 :Yb/Tm nanocrystals, we report here high-efficiency emission depletion through surface migration. Using a dual-beam, continuous-wave laser manipulation scheme (975-nm excitation and 730-nm de-excitation), we achieved an emission depletion efficiency of over 95% and a low saturation intensity of 18.3 kW cm −2 . Emission depletion by surface migration through gadolinium sublattices enables super-resolution imaging with sub-20 nm lateral resolution. Our approach circumvents the fundamental limitation of high-intensity STED microscopy, providing autofluorescence-free, re-excitation-background-free imaging with a saturation intensity over three orders of magnitude lower than conventional fluorophores. We also demonstrated super-resolution imaging of actin filaments in Hela cells labeled with 8-nm nanoparticles. Combined with the highly photostable lanthanide luminescence, surface-migration emission depletion (SMED) could provide a powerful mechanism for low-power, super-resolution imaging or biological tracking as well as super-resolved optical sensing/writing and lithography.
Stimulated emission depletion (STED) is the key optical technology enabling super-resolution microscopy below the diffraction limit. Here, we demonstrate that modulation of STED in the time domain, combined with properly designed lock-in detection, can radically enhance the contrast of fluorescent images of strongly autofluorescent biotissues. In our experiments, the temporally modulated STED technique, implemented with low-intensity continuous-wave laser sources, is shown to provide an efficient all-optical suppression of a broadband fluorescent background, allowing the contrast of fluorescent images of mammal brain tissues tagged with nitrogen-vacancy diamond to be increased by five orders of magnitude.
The explosive growth of information worldwide emerges as a great challenge for the currently-available big data center platform and compels the development of novel methods and storage devices. Far-field super-resolution techniques have shown the potential to achieve nanoscale three-dimensional optical data storage resulting in a single-disc capacity towards petabytes. In particular, super-resolution photoinduction-inhibited nanolithography (SPIN) has been used to write features with size of 9 nm, while stimulated emission depletion (STED) microscopy is suitable for super-resolution optical data reading. However, the combination of SPIN and STED microscopy for super-resolution optical data storage is presently limited by the high intensity required for the inhibition beam, which results in high energy consumption and damage of the data bits, and the lack of an optically-activatable material for data read-out after SPIN. Recently, rare-earth doped nanocrystals, featuring long luminescence lifetime and emission bands ranging from ultraviolet to near-infrared, have been proven adapt for low-power super-resolution optical data reading through STED microscopy and may be implemented for super-resolution data writing fully based on optical methods. Here, we report about the development of rare-earth doped nanocrystals for ultra-low power, ultra-high capacity super-resolution optical data storage. Core-shell nanoparticles were prepared via co-precipitation and measurements of emission intensity and fluorescence lifetime have been performed. Subsequently, rare-earth doped nanocrystals have been used for optical data storage under 980-nm laser excitation and the data bits were successfully retrieved back by STED microscopy. Finally, simulation results indicate the feasibility of nano-sized recordings and thus a boost of storage capacity is expected.
As one of the most critical methods for optical super-resolved microscopy, stimulated emission depletion (STED) microscopy has been widely applied in biological and chemical fields, leading to the Nobel prize of 2014 in chemistry. In cold atomic systems, fast and high-resolution microscopy of individual atoms is crucial since it can provide direct information on the dynamics and correlations of the system. Here, we demonstrate nanosecond two-dimensional snapshots of a single trapped ion beyond the optical diffraction limit, by combining the main idea of STED with the quantum state transition control in cold atoms. We achieve a spatial resolution up to 175 nm and a time resolution up to 50 ns simultaneously using a NA=0.1 objective in the experiment, which is improved over ten times compared to direct fluorescence imaging. To show the potential of this method, we applied it to record the motion of the trapped ion and observe one cycle of the secular motion of the ion with a displacement detection sensitivity of 10 nm. Our method provides a powerful tool for probing particles' positions, momenta and correlations, as well as their dynamics in cold atomic systems.
The spatial resolution and fluorescence signal amplitude in stimulated emission depletion (STED) microscopy is limited by the photostability of available fluorophores. Here, we show that negatively-charged silicon vacancy (SiV) centers in diamond are promising fluorophores for STED microscopy, owing to their photostable, near-infrared emission and favorable photophysical properties. A home-built pulsed STED microscope was used to image shallow implanted SiV centers in bulk diamond at room temperature. The SiV stimulated emission cross section for 765-800 nm light is found to be (4.0 ± 0.3)×10^−17 cm^2, which is approximately 2-4 times larger than that of the negatively-charged diamond nitrogen vacancy center and approaches that of commonly-used organic dye molecules. We performed STED microscopy on isolated SiV centers and observed a lateral full-width-at-half- maximum spot size of 89 ± 2 nm, limited by the low available STED laser pulse energy (0.4 nJ). For a pulse energy of 5 nJ, the resolution is expected to be ∼20 nm. We show that the present microscope can resolve SiV centers separated by �� < 150 nm that cannot be resolved by confocal microscopy.
The spatial resolution and fluorescence signal amplitude in stimulated emission depletion (STED) microscopy is limited by the photostability of available fluorophores. Here, we show that negatively charged silicon vacancy (SiV) centers in diamond are promising fluorophores for STED microscopy, owing to their photostable, near-infrared emission and favorable photophysical properties. A home-built pulsed STED microscope was used to image shallow implanted SiV centers in bulk diamond at room temperature. The SiV stimulated emission cross section for 765–800 nm light is found to be (4.0 ± 0.3) × 10 –17 cm 2, which is approximately 2–4 times larger than that of the negatively charged diamond nitrogen vacancy center and approaches that of commonly used organic dye molecules. We performed STED microscopy on isolated SiV centers and observed a lateral full-width-at-half-maximum spot size of 89 ± 2 nm, limited by the low available STED laser pulse energy (0.4 nJ). For a pulse energy of 5 nJ, the resolution is expected to be ∼20 nm. We show that the present microscope can resolve SiV centers separated by ≲150 nm that cannot be resolved by confocal microscopy.
Abstract In stimulated emission depletion (STED) microscopy, the resolution can be improved by directly depleting electrons from the target excitation state to the ground state at the doughnut area. In the study, an indirectly STED method for STED microscopy was proposed. A dynamic model based on state transition process for STED microscopy with triexciton fluorescence quantum dots was firstly developed. The depletion efficiencies of both direct and indirect ways were then theoretically investigated. Compared with direct depletion of quantum dots from their triexciton state to the ground state, indirect depletion of quantum dots from their biexciton state to the ground state was more efficient for triexciton depletion. This indirect depletion method offers a new route to reduce the depletion laser intensity for STED microscopy in order to achieve a nanometer imaging resolution.