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arXiv:2607.12174

Anticipating Decoder Side-channel Attacks in Fault-tolerant Quantum Computers

Shashvat Shukla, Dan E. Browne, Shin Nishio

quant-phcs.CRSubmitted Jul 13, 2026• Announced Jul 15, 2026• 0 citations
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Abstract

As quantum computing emerges as an applied technology, there is a growing need to protect quantum computers against information security attacks. This work identifies a new class of side-channel attacks against fault-tolerant quantum computers, in which the syndrome data that is sent to the decoder system is used to infer which computation (logical circuit) is taking place on the quantum computer. Our work introduces the concept of gate fingerprints, which describes those patterns present in syndrome data that indicate which logical operation took place on the quantum computer. We show different effects by which logical operations produce gate fingerprints by focusing on Clifford+T computation in the surface code. We then explore how gate fingerprint information can be used to make inferences about the circuits or algorithms run on a quantum computer. Our findings indicate that decoder systems can be a vector for side-channel attacks and thus to prevent this, decoder systems should either be secured or built by a trusted party.

Comments
10 pages, 10 figures. Comments are welcome

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As quantum computing emerges as an applied technology, there is a growing need to protect quantum computers against information security attacks. This work identifies a new class of side-channel attacks against fault-tolerant quantum computers, in which the syndrome data that is sent to the decoder system is used to infer which computation (logical circuit) is taking place on the quantum computer. Our work introduces the concept of gate fingerprints, which describes those patterns present in syndrome data that indicate which logical operation took place on the quantum computer. We show different effects by which logical operations produce gate fingerprints by focusing on Clifford+T computation in the surface code. We then explore how gate fingerprint information can be used to make inferences about the circuits or algorithms run on a quantum computer. Our findings indicate that decoder systems can be a vector for side-channel attacks and thus to prevent this, decoder systems should either be secured or built by a trusted party.
As the quantum computing field transitions toward Fault-Tolerant Quantum Computing (FTQC), intensive efforts are focused on scaling architectures and realizing active error correction. However, this shift introduces security surfaces that remain largely unexplored. Fault-tolerant quantum computers pair a quantum processor with a classical decoder that sits on the critical path of every syndrome-extraction round. For the first time, this work demonstrates that the wall-clock time each decoder takes to process a syndrome measurement and decoding round constitutes a novel, exploitable hardware side channel on physical quantum hardware. Using per-shot decoder timings from three IBM Heron processors collected over a 68-day window, the decode-time distribution alone allows a passive observer to (i) reconstruct the shot-by-shot detector-firing distribution and estimate the workload's logical error rate pLp_LpL​, (ii) infer the code distance in use, and (iii) fingerprint the specific physical device with up to 89% accuracy (a random guess is 33%), with a pooled two-sample Kolmogorov-Smirnov test confirming the decode-time distributions are statistically distinct. In noisy simulation inspired by public data from Google's 105-qubit Willow processor, decoder timing further distinguishes 9 surface-code patches at different locations on the chip with 81% accuracy, showing the side channel persists on below-threshold fault-tolerant hardware from a different vendor and code family.
Benchmarking physical devices and verifying logical algorithms are important tasks for scalable fault-tolerant quantum computing. Numerous protocols exist for benchmarking devices before running actual algorithms. In this work, we show that both physical and logical errors of fault-tolerant circuits can even be characterized in-situ using syndrome data. To achieve this, we map general fault-tolerant Clifford circuits to subsystem codes using the spacetime code formalism and develop a scheme for estimating Pauli noise in Clifford circuits using syndrome data. We give necessary and sufficient conditions for the learnability of physical and logical noise from given syndrome data, and show that we can accurately predict logical fidelities from the same data. Importantly, our approach requires only a polynomial sample size, even when the logical error rate is exponentially suppressed by the code distance, and thus gives an exponential advantage against methods that use only logical data such as direct fidelity estimation. We demonstrate the practical applicability of our methods in various scenarios using synthetic data as well as the experimental data from a recent demonstration of fault-tolerant circuits by Bluvstein et al. [Nature 626, 7997 (2024)]. Our methods provide an efficient, in-situ way of characterizing a fault-tolerant quantum computer to help gate calibration, improve decoding accuracy, and verify logical circuits.
Machine learning (ML) decoders are increasingly used in quantum error correction (QEC) to model noise, analyze imperfect syndrome measurements, and replace iterative matching algorithms with a learned inference pass, making them a critical component of the classical control stack of a fault-tolerant quantum computer. Prior security analysis of the ML decoders in the controller stack has addressed integrity and fault-injection attacks on the decoders. This work is the first to explore physical power side-channel attacks on ML decoders. In particular, it studies a convolutional Deep Q-Learning decoder for the distance-5 surface code. This work profiles the decoder to capture the power signatures generated during classification tasks and trains a classifier to identify which qubit the decoder identified as having errors based on the power signatures. The trained classifier is then applied to test data, where it recovers the correct data qubit label from the decoder’s side-channel data with up to 83.2%83.2\%83.2% accuracy across 25 classes, against 4%4\%4% for random guessing. A second classifier is trained to identify the type of error labeled by the decoder, Pauli X or Z, and reaches 84.6%84.6\%84.6% accuracy, against 50%50\%50% for random guessing. This work further performs an initial study of a timing channel, which complements the power side channels, exploring how the duration of the decoder’s first convolutional layer can leak the code size for which the decoder is compiled. All the side-channel attacks demonstrated in this work motivate treating the embedded QEC decoder as a confidentiality-critical component of the quantum control stack.
Benchmarking physical devices and verifying logical algorithms are important tasks for scalable fault-tolerant quantum computing. Numerous protocols exist for benchmarking devices before running actual algorithms. In this work, we show that both physical and logical errors of fault-tolerant circuits can even be characterized using syndrome data. To achieve this, we map general fault-tolerant Clifford circuits to subsystem codes using the spacetime code formalism and develop a scheme for estimating Pauli noise in Clifford circuits using syndrome data. We give necessary and sufficient conditions for the learnability of physical and logical noise from given syndrome data, and show that we can accurately predict logical fidelities from the same data. Importantly, our approach requires only a polynomial sample size, even when the logical error rate is exponentially suppressed by the code distance, and thus gives an exponential advantage against methods that use only logical data such as direct fidelity estimation. We demonstrate the practical applicability of our methods in various scenarios using synthetic data as well as the experimental data from a recent demonstration of fault-tolerant circuits by Bluvstein [ , 7997 (2024)]. Our methods provide an efficient, way of characterizing a fault-tolerant quantum computer to help gate calibration, improve decoding accuracy, and verify logical circuits.
The rapidly growing interest in quantum computing also increases the importance of securing these computers from various physical attacks. Constantly increasing qubit counts and improvements to the fidelity of the quantum computers hold great promise for the ability of these computers to run novel algorithms with highly sensitive intellectual property. However, in today's cloud-based quantum computer setting, users lack physical control over the computers. Physical attacks, such as those perpetrated by malicious insiders in data centers, could be used to extract sensitive information about the circuits being executed on these computers. This work shows the first exploration and study of power-based side-channel attacks in quantum computers. The explored attacks could be used to recover information about the control pulses sent to these computers. By analyzing these control pulses, attackers can reverse-engineer the equivalent gate-level description of the circuits, and the algorithms being run, or data hard-coded into the circuits. This work introduces five new types of attacks, and evaluates them using control pulse information available from cloud-based quantum computers. This work demonstrates how and what circuits could be recovered, and then in turn how to defend from the newly demonstrated side-channel attacks on quantum computing systems.
With the rapidly growing interest in quantum computing also grows the importance of securing these quantum computers from various physical attacks. Constantly increasing qubit counts and improvements to the fidelity of the quantum computers hold great promise for the ability of these computers to run novel algorithms with highly sensitive intellectual property. However, in today's cloud-based quantum computer setting, users lack physical control over the computers. Physical attacks, such as those perpetrated by malicious insiders in data centers, could be used to extract sensitive information about the circuits being executed on these computers. Indeed, this work shows for the first time that power-based side-channel attacks could be deployed against quantum computers. Such attacks can be used to recover information about the control pulses sent to these computers. By analyzing these control pulses, attackers can reverse-engineer the equivalent gate-level description of the circuits, and possibly even the secret algorithms being run. This work introduces five new types of attacks, and evaluates them using control pulse information available from cloud-based quantum computers. This work demonstrates how and what circuits could be recovered, and then in turn how to defend from the newly demonstrated side-channel attacks on quantum~computers.