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arXiv:2606.26912

A Givens-exchange ansatz for molecular variational eigensolvers

Azadeh Alavi, Fatemeh Kouchmeshki, Muhammad Usman, Yongli Ren, Ke Deng, Hossein Akhoundi, Abdolrahman Alavi

physics.chem-phquant-phSubmitted Jun 25, 2026• Announced Jun 26, 2026• 0 citations
v1 · Jun 25, 2026v2 · Jun 26, 2026
arXivHTMLPDF

Abstract

Molecular ground-state energies help determine conformer rankings, reaction energetics, and electronic effects in computational drug discovery, but accurate calculations become difficult when strong correlation or large active spaces are important. Variational quantum eigensolvers estimate these energies by optimizing a parameterized quantum state, making ansatz design central to both accuracy and cost. We study a fixed-topology Givens-exchange ansatz that avoids architecture search. The circuit starts from the computational-basis state with the lowest diagonal Hamiltonian expectation and applies local RY rotations with two ordered all-pair Givens exchange blocks. Parameters are optimized using Hamiltonian expectation values, while exact diagonalization is used only after optimization to compute errors and fidelities. Across six fixed seeds, coefficient-verified LiH-6 and H2O-8 Hamiltonians, together with a BeH2-6 public-specification candidate, are chemically accurate in every run. The corresponding six-seed mean errors are 0.000000124 Hartree, equivalent to 0.000124 milli-Hartree; 0.000128558 Hartree, equivalent to 0.128558 milli-Hartree; and 0.000002152 Hartree, equivalent to 0.002152 milli-Hartree, respectively. On LiH-6 and H2O-8, these mean errors are lower than the published point errors of the compared quantum-architecture-search methods, while the ansatz uses a larger pre-compilation macro budget. The method is therefore an accurate, reproducible, and search-free reference template for molecular variational eigensolvers.

Comments
17 pages, 3 figures

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Molecular ground-state energies help determine conformer rankings, reaction energetics, and electronic effects in computational drug discovery, but accurate calculations become difficult when strong correlation or large active spaces are important. Variational quantum eigensolvers estimate these energies by optimizing a parameterized quantum state, making ansatz design central to both accuracy and cost. We study a fixed-topology Givens-exchange ansatz that avoids architecture search. The circuit starts from the computational-basis state with the lowest diagonal Hamiltonian expectation and applies local RY rotations with two ordered all-pair Givens exchange blocks. Parameters are optimized using Hamiltonian expectation values, while exact diagonalization is used only after optimization to compute errors and fidelities. Across six fixed seeds, coefficient-verified LiH-6 and H2O-8 Hamiltonians, together with a BeH2-6 public-specification candidate, are chemically accurate in every run. The corresponding six-seed mean errors are 0.000000124 Hartree, equivalent to 0.000124 milli-Hartree; 0.000128558 Hartree, equivalent to 0.128558 milli-Hartree; and 0.000002152 Hartree, equivalent to 0.002152 milli-Hartree, respectively. On LiH-6 and H2O-8, these mean errors are lower than the published point errors of the compared quantum-architecture-search methods, while the ansatz uses a larger pre-compilation macro budget. The method is therefore an accurate, reproducible, and search-free reference template for molecular variational eigensolvers.
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Variational quantum eigensolver ansätze hold considerable promise for ground-state energy calculations on near-term quantum hardware, yet most promising ansatz designs currently strongly depend on how well the molecular orbital basis captures the electronic correlation of the system. Computing optimized orbital coefficients via classical routines is computationally expensive and must be performed independently for each molecular geometry -- a bottleneck that limits scalability across chemical space. We present a graph neural network framework that predicts optimized orbital coefficients directly from molecular geometry and pair-wise bonding structure. Trained on hydrogenic systems of modest size (H4H_4H4​ and H6H_6H6​) across tens of thousands of geometries, our model transfers to larger, unseen systems (H8H_8H8​, H10H_{10}H10​ and H12H_{12}H12​) without retraining -- demonstrating strong out-of-distribution generalization with respect to system size. When evaluating on structured and random configurations, and comparing against energies obtained with full classical optimization, our model reaches mean absolute energy errors O(102)\mathcal{O}(10^2)O(102) and O(10)\mathcal{O}(10)O(10) milli-Hartrees, respectively. Beyond energy estimation, the predicted orbitals serve as high-quality warm-start initializations that substantially reduce optimizer iterations to ground-state energy convergence. These results establish graph neural networks as an effective and scalable strategy for accelerating orbital optimization in hybrid quantum-classical workflows, directly reducing the classical pre-processing overhead that currently limits the practical deployment of variational quantum eigensolver on near-term quantum hardware.
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Abstract We present a comprehensive quantum chemical study of nine molecules H₂, HeH⁺, LiH, BeH₂, H₂O, NH₃, CH₄, CO₂, and N₂ using the Variational Quantum Eigensolver (VQE) algorithm implemented in Qiskit 2.4.1. Molecular Hamiltonians are constructed in the STO-3G minimal basis set, transformed to qubit operators via the Jordan-Wigner mapping, and optimized using the n-local hardware-efficient ansatz with the SLSQP optimizer. Ground state energies are benchmarked against Full Configuration Interaction (FCI)/STO-3G reference values from authoritative literature sources. VQE achieves accuracies from 96.46% (HeH⁺) to 99.99% (H₂), average 98.68%. Potential energy surfaces are generated for all nine molecules and compared with high level ab initio literature PES references including the Kolos-Wolniewicz H₂ curve, the Polyansky water surface, and the Bytautas-Ruedenberg N₂ FCI surface. Equilibrium bond lengths agree with experiment to within 0.000–0.006 Å. Quantum ansatz circuits are analyzed in detail for all molecules. These results confirm the viability of near-term VQE algorithms for molecular quantum chemistry across diverse bond types and geometries.
Accurate prediction of binding energies between drug candidates and target molecules is essential in computational drug discovery, as stronger (more negative) binding energies suggest higher efficacy. This energy corresponds to the ground state of the molecular system and can be computed using methods such as Full Configuration Interaction (FCI), Hartree-Fock (HF), Variational Quantum Eigensolver (VQE), and Quantum Phase Estimation (QPE). While FCI offers benchmark accuracy, its computational cost renders it impractical for larger systems. HF scales efficiently but at the expense of precision. QPE, though theoretically robust, is currently constrained by hardware limitations. VQE emerges as a practical alternative for Noisy Intermediate-Scale Quantum (NISQ) devices, balancing accuracy and feasibility. Nevertheless, quantum noise significantly affects VQE performance. To address this, we incorporate Zero Noise Extrapolation (ZNE) to mitigate errors and improve energy estimates. This study compares these approaches and demonstrates the efficacy of the VQEZNE framework in generating reliable binding energy calculations for drug design applications.
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