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arXiv:2604.01176

High Performance Quantum Emulation for Chemistry Applications with Hyperion

Olivier Adjoua, Siwar Badreddine, César Feniou, Igor Chollet, Diata Traore, Guillaume Michel, Jean-Philip Piquemal

quant-phphysics.chem-phSubmitted Apr 1, 2026• Announced Apr 2, 2026• 0 citations
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Abstract

The strategic demand for quantum hardware currently outpaces the availability of near-term devices, necessitating high-performance software emulators to validate novel protocols. We introduce Hyperion, a massively parallel, GPU-accelerated quantum emulator architected to bypass the classical memory walls inherent in strongly correlated quantum chemistry simulations. Hyperion leverages custom-optimized Sparse Matrix-Sparse Vector (SpMspV) kernels to natively accelerate exact matrix-vector multiplications, enabling strictly accurate State-Vector (SV) ADAPT-VQE simulations for up to 32 qubits on multi-node platforms. To scale beyond this hardware limit, we address the trade-off in pure Matrix Product State (MPS) emulators, where standard compression yields severe truncation errors and strict compression triggers intractable tensor rank explosions. We propose a novel partitioned emulation, namely the SV-MPS strategy: by routing non-interacting terms into an exact sparse SV core and delegating interacting terms to the MPS engine, this approach achieves emulation of 36 to 40 qubits with controlled approximations. This partitioning significantly reduces GPU resource requirements while maintaining robust accuracy across ADAPT-VQE iterations. Ultimately, Hyperion offers a high-fidelity platform dedicated to the development of new quantum algorithms for chemistry, enabling the modeling of realistic chemical systems at accuracies approaching the exact Full Configuration Interaction (FCI) / Complete Basis Set (CBS) limit.

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The strategic demand for quantum hardware currently outpaces the availability of near-term devices, necessitating high-performance software emulators to validate novel protocols. We introduce Hyperion, a massively parallel, GPU-accelerated quantum emulator architected to bypass the classical memory walls inherent in strongly correlated quantum chemistry simulations. Hyperion leverages custom-optimized Sparse Matrix-Sparse Vector (SpMspV) kernels to natively accelerate exact matrix-vector multiplications, enabling strictly accurate State-Vector (SV) ADAPT-VQE simulations for up to 32 qubits on multi-node platforms. To scale beyond this hardware limit, we address the trade-off in pure Matrix Product State (MPS) emulators, where standard compression yields severe truncation errors and strict compression triggers intractable tensor rank explosions. We propose a novel partitioned emulation, namely the SV-MPS strategy: by routing non-interacting terms into an exact sparse SV core and delegating interacting terms to the MPS engine, this approach achieves emulation of 36 to 40 qubits with controlled approximations. This partitioning significantly reduces GPU resource requirements while maintaining robust accuracy across ADAPT-VQE iterations. Ultimately, Hyperion offers a high-fidelity platform dedicated to the development of new quantum algorithms for chemistry, enabling the modeling of realistic chemical systems at accuracies approaching the exact Full Configuration Interaction (FCI) / Complete Basis Set (CBS) limit.
Quantum computing allows, in principle, the encoding of the exponentially scaling many-electron wave function onto a linearly scaling qubit register, offering a promising solution to overcome the limitations of traditional quantum chemistry methods. An essential requirement for ground state quantum algorithms to be practical is the initialization of the qubits to a high-quality approximation of the sought-after ground state. Quantum state preparation enables the generation of approximate eigenstates derived from classical computations but is frequently treated as an oracle in quantum information. In this study, we investigate the quantum state preparation of prototypical strongly correlated systems' ground state, up to 28 qubits, using the Hyperion-1 GPU-accelerated state-vector emulator. Various variational and nonvariational methods are compared in terms of their circuit depth and classical complexity. Our results indicate that the recently developed Overlap-ADAPT-VQE algorithm offers the most advantageous performance for near-term applications.
Quantum computing is moving beyond its early stage and seeking for commercial applications in chemical and biomedical sciences. In the current noisy intermediate-scale quantum computing era, the quantum resource is too scarce to support these explorations. Therefore, it is valuable to emulate quantum computing on classical computers for developing quantum algorithms and validating quantum hardware. However, existing simulators mostly suffer from the memory bottleneck so developing the approaches for large-scale quantum chemistry calculations remains challenging. Here we demonstrate a high-performance and massively parallel variational quantum eigensolver (VQE) simulator based on matrix product states, combined with embedding theory for solving large-scale quantum computing emulation for quantum chemistry on HPC platforms. We apply this method to study the torsional barrier of ethane and the quantification of the protein-ligand interactions. Our largest simulation reaches 1000 qubits, and a performance of 216.9 PFLOP/s is achieved on a new Sunway supercomputer, which sets the state-of-the-art for quantum computing emulation for quantum chemistry.
We introduce a parallel, GPU-accelerated implementation of the iterative qubit coupled cluster (iQCC) method that overcomes the exponential growth of the transformed Hamiltonian -- the principal bottleneck for classical emulation of quantum chemistry circuits. By distributing Hamiltonian terms across compute nodes via bit-wise partitioning and offloading Pauli contractions to GPUs, we achieve speedups exceeding two orders of magnitude over the serial CPU approach. Crucially, iQCC confines the variational evolution to a classically simulable operator subspace by selecting entanglers exclusively from the Direct Interaction Space, which guarantees non-vanishing energy gradients at every iteration and thereby naturally avoids the barren-plateau phenomenon that renders highly expressive quantum circuits untrainable. Leveraging these algorithmic and hardware advances, we simulate electronic-structure Hamiltonians for industrially relevant ruthenium catalysts in the 100--124 qubit regime, completing full ground-state calculations on NVIDIA GPUs in the ranges of 1.2 - 45 hrs and surpassing the accuracy of Density Matrix Renormalization Group. These results effectively de-quantize a significant portion of the NISQ roadmap: quantum advantage for chemistry is often assumed to emerge beyond ∼50{\sim}50∼50 qubits, yet our work demonstrates that this frontier lies significantly further -- potentially past 200 qubits -- reshaping expectations for where genuine quantum advantage may first appear.
As quantum computers of non-trivial size become available in the near future, it is imperative to develop tools to emulate small quantum computers. This allows for validation and debugging of algorithms as well as exploring hardware-software co-design to guide the development of quantum hardware and architectures. The simulation of quantum computers entails multiplications of sparse matrices with very large dense vectors of dimension 2n, where n denotes the number of qubits, making this a memory-bound and network bandwidth-limited application. We introduce the concept of a quantum computer emulator as a component of a software framework for quantum computing, enabling a significant performance advantage over simulators by emulating quantum algorithms at a high level rather than simulating individual gate operations. We describe various optimization approaches and present benchmarking results, establishing the superiority of quantum computer emulators in terms of performance.
Efficient manipulation of Pauli-algebraic objects is a key bottleneck in the classical emulation and benchmarking of quantum algorithms for chemistry and many-body physics. This bottleneck appears in Hamiltonian construction, variational ansatz preparation, expectation-value and gradient evaluation, and real-time propagation, all of which require repeated Pauli-algebra operations. Here, we present a high-performance Pauli-algebra framework tailored to quantum many-body and quantum-chemical simulations. The framework combines compact binary symplectic encoding, canonical coefficient reduction, and grouped sparse operator representations that exploit shared bit-flip patterns among Pauli strings. The resulting Julia/C\texttt{++} implementation accelerates Pauli multiplication, Hamiltonian construction, and operator--state multiplication in sparse and symmetry-adapted many-electron spaces. Benchmarks demonstrate efficient Hamiltonian construction, large-active-space VQE and ADAPT-VQE calculations, and real-time variational dynamics on modern multicore CPU and GPU architectures. These results show that structure-aware Pauli-algebra engines provide a scalable classical backend for developing and benchmarking quantum algorithms in quantum chemistry and many-body simulation.
Quantum computing holds promise for computational chemistry, but near-term quantum hardware remains limited by noise and scale, motivating classical bridging technologies such as quantum emulators. We present an application-specific systems-level benchmark of matrix product state (MPS) tensor-network emulation for real-time Hamiltonian evolution of a density matrix embedding theory (DMET)-embedded sulfonyl-fluoride pharmaceutical fragment, using state-vector simulation as reference. We evaluate runtime, accuracy, resource requirements, and entanglement growth across active spaces from 4 to 24 qubits for a one-body temporal observable used as a quantum fingerprint for reactivity prediction. The results identify a practical boundary for this workflow. At fixed bond dimension, MPS emulation retains favorable scaling, but the bond dimension required to estimate the observable within a 1.6 mHa chemical-accuracy threshold grows rapidly with active-space size. At 20-24 qubits, it approaches the maximum available MPS representation, eliminating the runtime advantage over state-vector simulation. Entanglement entropy analysis shows that increasing bipartite entanglement in the time-evolved state drives this cost growth, consistent with a mismatch between a one-dimensional MPS ansatz and the non-local correlations generated by molecular electronic dynamics. We do not claim a universal crossover across molecules, observables, mappings, or tensor-network geometries. Rather, this study measures where MPS emulation ceases to be an efficient classical surrogate for this chemically motivated Hamiltonian-simulation workflow. The results motivate entanglement-aware algorithm design, orbital-ordering and mapping optimization, alternative tensor-network geometries, and ultimately fault-tolerant quantum hardware for regimes where accurate molecular dynamics generate non-compressible entanglement.