Quantum optimization has gained increasing attention as advances in quantum hardware enable the exploration of problem instances approaching real-world scale. Among existing approaches, variational quantum algorithms and quantum annealing dominate current research; however, both typically rely on one-hot encodings that severely limit scalability. Pauli Correlation Encoding (PCE) was recently introduced as an alternative paradigm that reduces qubit requirements by embedding problem variables into Pauli correlations. Despite its promise, PCE has not yet been studied in the context of constrained optimization. In this work, we extend the PCE framework to constrained combinatorial optimization problems and evaluate its performance across multiple problem sizes. Our results show that the standard PCE formulation struggles to reliably enforce constraints, which motivates the introduction of the Iterative-$α$ PCE. This iterative strategy significantly improves solution quality, achieving consistent constraint satisfaction while yielding better cut sizes across a wide range of instances. These findings highlight both the limitations of current PCE formulations for constrained problems and the effectiveness of iterative strategies for advancing quantum optimization in the NISQ era.
Quantum optimization has gained increasing attention as advances in quantum hardware enable the exploration of problem instances approaching real-world scale. Among existing approaches, variational quantum algorithms and quantum annealing dominate current research; however, both typically rely on one-hot encodings that severely limit scalability. Pauli Correlation Encoding (PCE) was recently introduced as an alternative paradigm that reduces qubit requirements by embedding problem variables into Pauli correlations. Despite its promise, PCE has not yet been studied in the context of constrained optimization. In this work, we extend the PCE framework to constrained combinatorial optimization problems and evaluate its performance across multiple problem sizes. Our results show that the standard PCE formulation struggles to reliably enforce constraints, which motivates the introduction of the Iterative-α PCE. This iterative strategy significantly improves solution quality, achieving consistent constraint satisfaction while yielding better cut sizes across a wide range of instances. These findings highlight both the limitations of current PCE formulations for constrained problems and the effectiveness of iterative strategies for advancing quantum optimization in the NISQ era.
Pauli Correlation Encoding (PCE) compresses m binary variables onto n=O(m1/k) qubits by mapping them to commuting Pauli correlators, but its continuous expectation values must be decoded into feasible binary solutions, a challenge for dense-constraint problems. We apply PCE to mRNA secondary-structure prediction, formulated as a densely constrained QUBO, and train with a QUBO-space sigmoid loss thatpreserves the QUBO penalty structure. For decoding, we introduce the Problem-Aware Guided Decoder (PAGD), which scores candidate variable commitments by combining marginal QUBO energy reduction with a trained expectation-value prior and constraint-aware feasibility pruning. On six benchmark mRNA sequences (30-60 nt, 50-240 variables, 7-14 qubits), PAGD with 100 restarts achieves 75-100 percent near-optimal recovery, defined as P(gap<1%), for sequences up to 152 variables, compared with 0-30 percent for a sign-rounding plus local-search baseline. On the 240-variable instance, trained PAGD reaches 50 percent P(gap<1%) at 200 restarts, outperforming untrained-circuit and random-expectation-value controls. Hardware-scale tests extend the pipeline to three 102-105 nt instances (694-745 variables, 172,000-193,000 pair constraints, 23 qubits) on IBM Heron processors. The circuits transpile SWAP-free into 480 native two-qubit gates at depth 256, and PAGD decoded gaps on QPU runs match or beat simulator means for all three instances, including exact CPLEX-optimum recovery for one sequence. These results show that PCE-trained priors can survive deployment to noisy superconducting hardware at biologically relevant scale.
Quantum approaches for combinatorial optimization problems have attracted considerable attention in recent years. Among these approaches, Pauli Correlation Encoding (PCE) has emerged as a promising framework for quantum devices with limited qubit resources because it embeds optimization variables in expectation values of Pauli strings. However, the mechanisms underlying its performance and the reasons for its saturation remain unclear. In this work, we investigate these questions through a systematic analysis of expressivity and trainability. First, we compare PCE with classical surrogate models based on tensor networks whose structures progressively approach the topology of the PCE circuit. The results show that PCE attains comparable solution quality with substantially fewer trainable parameters, indicating strong parameter efficiency. Second, to determine whether the performance saturation of conventional PCE is caused by insufficient expressivity or by optimization difficulty, we perform a diagnostic expressivity test in which the circuit is trained toward reference configurations for Max-Cut. The results show that even shallow PCE circuits can represent strong solutions, indicating that the main bottleneck is not the representational power of the ansatz, but the trainability under the relaxed objective function. Motivated by this finding, we propose a multistage continuation framework that gradually transforms a smooth relaxed objective into a sharper objective that more closely approximates the target discrete problem. Numerical experiments on G-set instances with 800 vertices show that the proposed method consistently outperforms conventional PCE and is competitive with representative graph neural network (GNN) methods. These results clarify the main factors behind PCE performance and provide a practical strategy for improving PCE on quantum devices with limited qubit resources.
Variational quantum algorithms offer a promising route to combinatorial optimization, but their applicability is limited by the challenge of encoding large-scale problems within restricted qubit resources. In this work, we introduce a qubit-efficient variational framework based on Pauli correlation encoding (PCE) and apply it to electric power demand portfolio optimization. Binary variables are represented through expectation values of Pauli correlation operators, which encode multi-body correlations of the quantum state and provide a continuous relaxation enabling compact representations with few qubits. We further propose a two-stage hybrid formulation, in which a time-averaged problem provides initialization for a time-resolved optimization. Numerical simulations demonstrate near-optimal performance across problem sizes ranging from m=18 to 10,296, with normalized cost gaps on the order of 10−4 relative to solutions with certified optimality. We show that the performance is governed by the interplay between continuous relaxation and discretization: the effective resolution of the correlator representation determines how reliably improvements in the continuous loss translate into better discrete solutions, with larger systems exhibiting more consistent behavior. Finally, we demonstrate robustness on a trapped-ion quantum processor, where high-quality solutions are obtained despite noise and finite sampling. These results establish PCE as a physically motivated and qubit-efficient framework for large-scale combinatorial optimization.
Pauli Correlation Encoding (PCE) is a heuristic framework for binary optimisation that encodes classical variables into many-body Pauli observables. While PCE requires fewer qubits than other approaches, it relies on estimating a large number of Pauli expectation values whose signs determine the variables' values, which can incur substantial measurement overhead. Here, we introduce efficiently simulable PCE, a class of dequantised PCE realisations where all expectation values needed can be computed efficiently classically. We instantiate this idea using free-fermionic evolutions, realised by matchgate circuits, and Instantaneous Quantum Polynomial (IQP) circuits. On MaxCut, Maximum Independent Set, Multi-Dimensional Knapsack, and Max3SAT benchmarks, these methods produce high-quality solutions across problem sizes ranging from tens to thousands of variables. Our results show that PCE is naturally understood as a correlation-based optimisation framework with both quantum and classically simulable realisations. This yields a dequantised baseline for evaluating future quantum PCE implementations.
The continuous progress of quantum technologies has spurred the exploration of their potential applications across diverse fields, particularly in combinatorial optimisation. In this work, we study a quantum-classical optimisation framework based on Pauli Correlation Encoding, an encoding scheme that can represent m binary variables using a polynomial number of qubits. To evaluate the performance of the method, we use three classical optimisation problems against the instances of the QOPTLib benchmark. The study includes an analysis of the impact of the compression order of the encoding scheme, the problem structure, and hyperparameter selection on solution quality, as well as the role of post-processing in improving performance. Additionally, we study the effect of shot-based execution and hardware noise, showing how these factors influence both the accuracy of expected value estimation and the overall dynamics of the optimisation process. The results indicate that the proposed PCE-based framework achieves competitive performance against the benchmark and, in several cases, obtains equivalent or even superior solutions, highlighting its potential as an efficient encoding strategy for quantum optimisation in the NISQ and near fault-tolerant era.
The increasing complexity of 5G and emerging 6G wireless networks has intensified the need for scalable optimization techniques capable of addressing computationally challenging combinatorial problems. While quantum optimization offers a promising alternative, current near-term quantum hardware remains limited by qubit availability, noise, and scalability constraints. Pauli Correlation Encoding (PCE) has emerged as a qubit-efficient optimization framework that addresses these challenges through polynomial variable compression. However, the impact of compression on representability and solution recovery remains poorly understood. In this work, we investigate the hypothesis that increasing compression ratios introduce representability constraints arising from algebraic closure relationships among encoded Pauli observables. Using Maximum Independent Set benchmark problems, we evaluate multiple PCE ansatz designs and compression ratios. We find that ansatz selection is critical to both solution quality and feasibility, with two ansatz families consistently outperforming alternatives and achieving approximation ratios approaching 0.9. Furthermore, increasing circuit repetitions provides limited benefit and can degrade performance. Most notably, reducing compression by increasing the number of available qubits significantly improves raw solution quality, while post-processed performance remains comparatively stable. These findings suggest that representability effects play an important role in compressed PCE encodings and provide new insight into the relationship among compression, ansatz design, decoding, and solution quality in scalable quantum optimization.