Accurately and efficiently predicting the equilibrium geometries of large molecules remains a central challenge in quantum computational chemistry, even with hybrid quantum–classical algorithms. Two major obstacles hinder progress: the large number of qubits required and the prohibitive cost of conventional nested optimization. In this work, we introduce a co-optimization framework that combines Density Matrix Embedding Theory (DMET) with Variational Quantum Eigensolver (VQE) to address these limitations. This approach substantially reduces the required quantum resources, enabling the treatment of molecular systems significantly larger than previously feasible. We first validate our framework on benchmark systems, such as H 4 and H 2 O 2, before demonstrating its efficacy in determining the equilibrium geometry of glycolic acid (C 2 H 4 O 3 )─a molecule of a size previously considered intractable for quantum geometry optimization. Our results show the method achieves high accuracy while drastically lowering computational cost. This work thus represents a significant step toward practical, scalable quantum simulations, moving beyond the small, proof-of-concept molecules that have historically dominated the field. More broadly, our framework establishes a tangible path toward leveraging quantum advantage for the in silico design of complex catalysts and pharmaceuticals.
Accurately and efficiently predicting the equilibrium geometries of large molecules remains a central challenge in quantum computational chemistry, even with hybrid quantum–classical algorithms. Two major obstacles hinder progress: the large number of qubits required and the prohibitive cost of conventional nested optimization. In this work, we introduce a co-optimization framework that combines Density Matrix Embedding Theory (DMET) with Variational Quantum Eigensolver (VQE) to address these limitations. This approach substantially reduces the required quantum resources, enabling the treatment of molecular systems significantly larger than previously feasible. We first validate our framework on benchmark systems, such as H 4 and H 2 O 2, before demonstrating its efficacy in determining the equilibrium geometry of glycolic acid (C 2 H 4 O 3 )─a molecule of a size previously considered intractable for quantum geometry optimization. Our results show the method achieves high accuracy while drastically lowering computational cost. This work thus represents a significant step toward practical, scalable quantum simulations, moving beyond the small, proof-of-concept molecules that have historically dominated the field. More broadly, our framework establishes a tangible path toward leveraging quantum advantage for the in silico design of complex catalysts and pharmaceuticals.
Accurately capturing electron correlation in large-scale molecular systems remains one of the foremost challenges in quantum chemistry and a primary driver for the development of quantum algorithms. Classical configuration-interaction methods, while rigorous, suffer from exponential scaling, rendering them impractical for large or strongly correlated systems. Overcoming this limitation is central to realizing the promise of quantum computing in chemistry. Here, we investigate the pyridine-Li ion complex using three quantum algorithms: the variational quantum eigensolver (VQE), the subspace quantum diagonalization (SQD) method, and the recently introduced handover iterative VQE (HI-VQE). Our results demonstrate how new generations of hybrid quantum-classical frameworks overcome the scalability and noise sensitivity that constrain conventional VQE approaches. SQD and HI-VQE achieve ground-state energy calculations for problem sizes inaccessible to classical computation, marking a clear advance toward quantum advantage. In particular, HI-VQE enables calculations within active spaces as large as (24e,22o), requiring 44 qubits-well beyond the reach of classical CASCI and VQE. This capability provides a systematic pathway for incorporating increasing numbers of electrons into quantum treatment, thereby approaching exact molecular energies. Importantly, both SQD and HI-VQE exhibit robustness against hardware noise, a critical improvement over earlier approaches. By enabling quantum simulations of molecular systems previously deemed intractable, SQD and HI-VQE offer a realistic route toward practical quantum advantage in computational chemistry. The comparison between HI-VQE and SQD shows that optimizing circuit parameters is crucial for accurate simulation.
Variational quantum eigensolver (VQE) is a hybrid quantum-classical algorithm designed for noisy intermediate-scale quantum (NISQ) computers. It is promising for quantum chemical calculations (QCC) because it can calculate the ground-state energy of a target molecule. Although VQE has a potential to achieve a higher accuracy than classical approximation methods in QCC, it is challenging to achieve it on current NISQ computers due to the significant impact of noises. Density matrix embedding theory (DMET) is a well-known technique to divide a molecule into multiple fragments, which is available to mitigate the noise impact on VQE. However, our preliminary evaluation shows that the naive combination of DMET and VQE does not outperform a gold standard classical method. In this work, we present three approaches to mitigate the noise impact for the DMET+VQE combination. (1) The size of quantum circuits used by VQE is decreased by reducing the number of bath orbitals which represent interactions between multiple fragments in DMET. (2) Reduced density matrices (RDMs), which are used to calculate a molecular energy in DMET, are calculated accurately based on expectation values obtained by executing quantum circuits using a noise-less quantum computer simulator. (3) The parameters of a quantum circuit optimized by VQE are refined with mathematical post-processing. The evaluation using a noisy quantum computer simulator shows that our approaches significantly improve the accuracy of the DMET+VQE combination. Moreover, we demonstrate that on a real NISQ device, the DMET+VQE combination applying our three approaches achieves a higher accuracy than the gold standard classical method.
Variational quantum eigensolver (VQE) is a hybrid quantum-classical algorithm designed for noisy intermediate-scale quantum (NISQ) computers. It is promising for quantum chemical calculations (QCC) because it can calculate the ground-state energy of molecules. Although VQE has a theoretical potential to achieve a higher accuracy than classical approximation methods, it is challenging to achieve it on current NISQ computers due to the significant impact of noise. Density matrix embedding theory (DMET) is a well-known technique that can be used to decompose a molecule into multiple fragments, which is available to mitigate the noise impact on VQE. However, our preliminary evaluation shows that the naive combination of DMET and VQE hardly mitigates it. In this work, we present two proposals to mitigate the noise impact on the DMET+VQE combination. (1) The size of quantum circuits used by VQE is decreased by reducing the number of bath orbitals which represent interactions between multiple fragments in DMET. (2) While VQE is executed on a NISQ computer, reduced density matrices (RDMs), which are used to calculate the energy of fragments in DMET, are calculated accurately by executing quantum circuits using a noise-less quantum computer simulator. The evaluation using a noisy quantum computer simulator shows that our proposals improve the accuracy of the DMET+VQE combination by an order of magnitude.
With the aim of establishing a framework to efficiently perform the practical application of quantum chemistry simulation on near-term quantum devices, we envision a hybrid quantum--classical framework for leveraging problem decomposition (PD) techniques in quantum chemistry. Specifically, we use PD techniques to decompose a target molecular system into smaller subsystems requiring fewer computational resources. In our framework, there are two levels of hybridization. At the first level, we use a classical algorithm to decompose a target molecule into subsystems, and utilize a quantum algorithm to simulate the quantum nature of the subsystems. The second level is in the quantum algorithm. We consider the quantum--classical variational algorithm that iterates between an expectation estimation using a quantum device and a parameter optimization using a classical device. We investigate three popular PD techniques for our hybrid approach: the fragment molecular-orbital (FMO) method, the divide-and-conquer (DC) technique, and the density matrix embedding theory (DMET). We examine the efficacy of these techniques in correctly differentiating conformations of simple alkane molecules. In particular, we consider the ratio between the number of qubits for PD and that of the full system; the mean absolute deviation; and the Pearson correlation coefficient and Spearman's rank correlation coefficient. Sampling error is introduced when expectation values are measured on the quantum device. Therefore, we study how this error affects the predictive performance of PD techniques. The present study is our first step to opening up the possibility of using quantum chemistry simulations at a scale close to the size of molecules relevant to industry on near-term quantum hardware.
Quantum mechanics has introduced a new theoretical framework for the study of molecules, enabling the prediction of properties and dynamics through the solution of the Schrödinger equation applied to these systems. However, solving this equation is computationally expensive, which has led to the development of various mathematical frameworks and computational methods designed to balance the available resources with the desired level of accuracy. In particular, quantum computers have emerged as a promising technology with the potential to address these problems more efficiently in the coming decades, whether through reductions in memory, time, and energy consumption, i. e., reductions in computational complexity or by enhancing precision. This research field is known as Quantum Simulation. Given the current technological limitations of quantum computers, Variational Quantum Algorithms (VQAs), especially the Variational Quantum Eigensolver (VQE), stand out as a feasible approach to demonstrating advantages over classical methods in the near term. This feasibility arises from their lower demand for quantum gates and the reduced depth of the circuits required for their implementation. In this work, we present the application of quantum mechanics to the study of molecules, provide an introduction to the fundamentals of quantum computing, and explore the integration of these fields by employing the VQE in molecular simulations. Finally, we discuss the spatial and temporal complexity associated with the algorithm, highlighting its implications and challenges.
Scientific simulations demand methods combining scalability with predictive accuracy. Density Functional Theory (DFT) on High-Performance Computing (HPC) enables large-scale electronic-structure simulations but is limited by approximations affecting strongly correlated systems and band-gap predictions. Quantum computing offers a pathway to address this, though current Noisy Intermediate-Scale Quantum (NISQ) hardware remains constrained by qubit resources, noise, and execution cost.
This work presents a hybrid DFT-Quantum Embedding (QDFT) framework integrating classical HPC-based DFT with a quantum electronic-structure solver. Large systems are partitioned to isolate a chemically relevant active space, treated via the Variational Quantum Eigensolver (VQE), while the remaining degrees of freedom are described by DFT. The framework incorporates active-space selection, embedded Hamiltonian construction, symmetry preservation, operator mapping, self-consistent density updating, and modular classical-quantum coupling.
We focus on noiseless quantum simulation to systematically evaluate accuracy, convergence, active-space dependence, computational cost, and HPC scalability without hardware noise. Detailed profiling identifies computational bottlenecks and highlights limitations of CPU-based quantum simulation. A QPU runtime-estimation methodology is additionally developed to assess execution requirements on actual quantum hardware.
Results demonstrate quantum embedding's potential to improve selected electronic-structure properties while retaining classical HPC's scalability. Noisy quantum simulation and QPU execution remain key future directions, providing a pathway toward practical, scalable HPC-quantum hybrid simulations as hardware matures.