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arXiv:2405.18622

Biclustering a dataset using photonic quantum computing

Ajinkya Borle, Ameya Bhave

Published May 28, 2024• 0 citations
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Abstract

Biclustering is a problem in machine learning and data mining that seeks to group together rows and columns of a dataset according to certain criteria. In this work, we highlight the natural relation that quantum computing models like boson and Gaussian boson sampling (GBS) have to this problem. We first explore the use of boson sampling to identify biclusters based on matrix permanents. We then propose a heuristic that finds clusters in a dataset using Gaussian boson sampling by (i) converting the dataset into a bipartite graph and then (ii) running GBS to find the densest sub-graph(s) within the larger bipartite graph. Our simulations for the above proposed heuristics show promising results for future exploration in this area.

DOI
10.48550/arxiv.2405.18622

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Biclustering is a problem in machine learning and data mining that seeks to group together rows and columns of a dataset according to certain criteria. In this work, we highlight the natural relation that quantum computing models like boson and Gaussian boson sampling (GBS) have to this problem. We first explore the use of boson sampling to identify biclusters based on matrix permanents. We then propose a heuristic that finds clusters in a dataset using Gaussian boson sampling by (i) converting the dataset into a bipartite graph and then (ii) running GBS to find the densest sub-graph(s) within the larger bipartite graph. Our simulations for the above proposed heuristics show promising results for future exploration in this area.
Biclustering is a problem in machine learning and data mining that seeks to group together rows and columns of a dataset according to certain criteria. In this work, we highlight the natural relation that quantum computing models like boson and Gaussian boson sampling (GBS) have to this problem. We first explore the use of boson sampling to identify biclusters based on matrix permanents. We then propose a heuristic that finds clusters in a dataset using Gaussian boson sampling by (i) converting the dataset into a bipartite graph and then (ii) running GBS to find the densest sub-graph(s) within the larger bipartite graph. Our simulations for the above proposed heuristics show promising results for future exploration in this area.
Gaussian Boson Sampling (GBS) is a recently developed paradigm of quantum computing consisting of sending a Gaussian state through a linear interferometer and then counting the number of photons in each output mode. When the system encodes a symmetric matrix, GBS can be viewed as a tool to sample subgraphs: the most sampled are those with a large number of perfect matchings, and thus are the densest ones. This property has been the foundation of the novel clustering approach we propose in this work, called GBS-based clustering, which relies solely on GBS, without the need of classical algorithms. The GBS-based clustering has been tested on several datasets and benchmarked with two well-known classical clustering algorithms. Results obtained by using a GBS simulator show that on average our approach outperforms the two classical algorithms in two out of the three chosen metrics, proposing itself as a viable full-quantum clustering option.
Gaussian Boson Sampling (GBS) is a recently developed paradigm of quantum computing consisting of sending a Gaussian state through a linear interferometer and then counting the number of photons in each output mode. When the system encodes a symmetric matrix, GBS can be viewed as a tool to sample subgraphs: the most sampled are those with a large number of perfect matchings, and thus are the densest ones. This property has been the foundation of the novel clustering approach we propose in this work, called GBS-based clustering , which relies solely on GBS, without the need of classical algorithms. The GBS-based clustering has been tested on several datasets and benchmarked with two well-known classical clustering algorithms. Results obtained by using a GBS simulator show that on average, our approach outperforms the two classical algorithms in two out of the three chosen metrics, proposing itself as a viable quantum-classical hybrid clustering option.
Bipartite Gaussian boson sampling (BipartiteGBS) produces output probabilities governed by squared permanents of submatrices of arbitrary complex matrices, matching the nonsymmetric structure of directed graphs. Most GBS-based graph algorithms, however, rely on symmetric hafnian structure and are formulated for undirected problems. Here we propose a BipartiteGBS-based framework for directed-graph heuristic optimization. We introduce Max-Perm as a canonical optimization task for BipartiteGBS and derive a closed-form sampling enhancement factor relative to uniform classical sampling in this idealized setting. We then use permanent-biased BipartiteGBS samples to guide a genetic algorithm for the celebrated directed Hamiltonian cycle problem. Numerical experiments on Erdős--Rényi random directed graphs show that the resulting BipartiteGBS-enhanced algorithms improve success rates over a standard genetic algorithm and yield longer valid paths when no Hamiltonian cycle is found, while ablation tests indicate that BipartiteGBS-guided initialization is the dominant contributor. These results show how permanent-based photonic sampling can provide useful algorithmic guidance for asymmetric combinatorial search.
Gaussian boson sampling is a model of photonic quantum computing that has attracted attention as a platform for building quantum devices capable of performing tasks that are out of reach for classical devices. There is therefore significant interest, from the perspective of computational complexity theory, in solidifying the mathematical foundation for the hardness of simulating these devices. We show that, under the standard Anti-Concentration and Permanent-of-Gaussians conjectures, there is no efficient classical algorithm to sample from ideal Gaussian boson sampling distributions (even approximately) unless the polynomial hierarchy collapses. The hardness proof holds in the regime where the number of modes scales quadratically with the number of photons, a setting in which hardness was widely believed to hold but that nevertheless had no definitive proof. Crucial to the proof is a new method for programming a Gaussian boson sampling device so that the output probabilities are proportional to the permanents of submatrices of an arbitrary matrix. This technique is a generalization of Scattershot BosonSampling that we call BipartiteGBS. We also make progress towards the goal of proving hardness in the regime where there are fewer than quadratically more modes than photons (i.e., the high-collision regime) by showing that the ability to approximate permanents of matrices with repeated rows/columns confers the ability to approximate permanents of matrices with no repetitions. The reduction suffices to prove that GBS is hard in the constant-collision regime.
Gaussian Boson Sampling (GBS) is a quantum computational model that leverages linear optics to solve sampling problems believed to be classically intractable. Recent experimental breakthroughs have demonstrated quantum advantage using GBS, motivating its application to real-world combinatorial optimization problems. In this work, we reformulate the graph coloring problem as an integer programming problem using the independent set formulation. This enables the use of GBS to identify cliques in the complement graph, which correspond to independent sets in the original graph. Our method is benchmarked against classical heuristics and exact algorithms on two sets of instances: Erdős-Rényi random graphs and graphs derived from a smart-charging use case. The results demonstrate that GBS can provide competitive solutions, highlighting its potential as a quantum-enhanced heuristic for graph-based optimization.