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arXiv:1612.00557

A precise measure of avian magnetoreception based on quantum metrology

Li-Sha Guo, Bao-Ming Xu, Jian Zou, Bin Shao

Published Dec 2, 2016• 0 citations
arXivHTMLPDF

Abstract

The radical pair (RP) mechanism, which describes the quantum dynamics of a spatially separated electron pair, is considered as one of the principal models of avian magnetoreception. Different from the conventional phenomenological approach where the sensitivity of avian magnetoreception is characterized by the singlet yield $Φ_{S}$, we introduce the quantum Fisher information (QFI), which represents the maximum information about the magnetic field's direction extracted from the RP state, to give a precise measure of sensitivity of avian compass essentially. The consistency between our results and experimental observations suggests that QFI plays a decisive role in avian magnetoreception. Besides, within the framework of quantum metrology, we can judge the feasibility of any possible measurement scheme for avian magnetoreception, and shed light on an intrinsic relevance between the singlet yield and a concrete measurement scheme of our approach. The present work allows us to understand many things about avian magnetoreception from a fully new perspective of quantum metrology, and provide a new route to establish a direct connection between quantum information and many other biological functions.

DOI
10.48550/arxiv.1612.00557

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The radical pair (RP) mechanism, which describes the quantum dynamics of a spatially separated electron pair, is considered as one of the principal models of avian magnetoreception. Different from the conventional phenomenological approach where the sensitivity of avian magnetoreception is characterized by the singlet yield ΦSΦ_{S}ΦS​, we introduce the quantum Fisher information (QFI), which represents the maximum information about the magnetic field's direction extracted from the RP state, to give a precise measure of sensitivity of avian compass essentially. The consistency between our results and experimental observations suggests that QFI plays a decisive role in avian magnetoreception. Besides, within the framework of quantum metrology, we can judge the feasibility of any possible measurement scheme for avian magnetoreception, and shed light on an intrinsic relevance between the singlet yield and a concrete measurement scheme of our approach. The present work allows us to understand many things about avian magnetoreception from a fully new perspective of quantum metrology, and provide a new route to establish a direct connection between quantum information and many other biological functions.
The radical pair (RP) based compass is considered as one of the principal models of avian magnetoreception. Different from the conventional approach where the sensitivity of RP based compass is described by the singlet yield, we introduce the quantum Fisher information (QFI), which represents the maximum information about the magnetic field's direction extracted from the RP state, to quantify the sensitivity of RP based compass. The consistency between our results and experimental observations suggests that the QFI may serve as a measure to describe the sensitivity of RP based compass. Besides, within the framework of quantum metrology, we give two specific possible measurement schemes and find that the conventional singlet yield is corresponding to the measurement of total angular momentum. Moreover, we show that the measurement of fluctuation of the total magnetic moment is much more accurate than the singlet yield measurement, and is close to the optimal measurement scheme. Finally, the effects of entanglement and decoherence are also discussed in the spirit of our approach.
It is known that more than 50 species use the Earth's magnetic field for orientation and navigation. Intensive studies, particularly behavior experiments with birds, provide support for a chemical compass based on magnetically sensitive free radical reactions as a source of this sense. However, the fundamental question of how quantum coherence plays an essential role in such a chemical compass model of avian magnetoreception yet remains controversial. Here, we show that the essence of the chemical compass model can be understood in analogy to a quantum interferometer exploiting global quantum coherence rather than any subsystem coherence. Within the framework of quantum metrology, we quantify global quantum coherence and correlate it with the function of chemical magnetoreception. Our results allow us to understand and predict how various factors can affect the performance of a chemical compass from the unique perspective of quantum coherence assisted metrology. This represents a crucial step to affirm a direct connection between quantum coherence and the function of a chemical compass.
Radical-ion pairs and their reactions have triggered the study of quantum effects in biological systems. This is because they exhibit a number of effects best understood within quantum information science, and at the same time are central in understanding the avian magnetic compass and the spin transport dynamics in photosynthetic reaction centers. Here we address radical-pair reactions from the perspective of quantum metrology. Since the coherent spin motion of radical pairs is effected by an external magnetic field, these spin-dependent reactions essentially realize a biochemical magnetometer. Using the quantum Fisher information, we find the fundamental quantum limits to the magnetic sensitivity of radical-pair magnetometers, arriving at a sensitivity $\ensuremath{\delta}B=2\phantom{\rule{0.16em}{0ex}}\mathrm{pT}/\ensuremath{\tau}[1\phantom{\rule{0.16em}{0ex}}\ensuremath{\mu}\text{s}]\sqrt{{\ensuremath{\nu}}_{0}[{10}^{12}]}$, given in terms of radical-pair lifetime $\ensuremath{\tau}$ and number of radical pairs ${\ensuremath{\nu}}_{0}$. We then explore how well the usual measurement scheme considered in radical-pair reactions, the measurement of reaction yields, approaches the fundamental limits. In doing so, we find the optimal hyperfine interaction Hamiltonian that leads to the best magnetic sensitivity as obtained from reaction yields. This is still an order of magnitude smaller than the absolute quantum limit. Finally, we demonstrate that with a realistic quantum reaction control reminding one of Ramsey interferometry, here presented as a quantum circuit involving the spin-exchange interaction and a recently proposed molecular switch, we can approach the fundamental quantum limit within a factor of 2. This work opens the application of well-advanced quantum metrology methods to biological systems.
The radical pair mechanism is one of the two main hypotheses to explain the navigability of animals in weak magnetic fields, enabling e.g. birds to see the Earth's magnetic field. It also plays an essential role in the field of spin chemistry. Here, we show how quantum control can be used to either enhance or reduce the performance of such a chemical compass, providing a new route to further study the radical pair mechanism and its applications. We study the role of quantum entanglement in this mechanism, and demonstrate intriguing connections between radical-pair entanglement and the magnetic field sensitivity of the compass. Beyond their immediate application to the radical pair mechanism, these results also demonstrate how state-of-the-art quantum technologies could potentially be used to probe and control biological functions.
This repository contains the computational framework, simulation code, and raw data used in the manuscript "Quantum Entanglement and Information Theory in Radical Pair Navigation." We built the simulation framework using Python and the Quantum Toolbox in Python (QuTiP v4.7). The code models the open quantum system dynamics of the FAD•−/Trp•+ radical pair mechanism (RPM) implicated in avian magnetoreception. The repository includes scripts to compute the following: Spin Hamiltonian Dynamics: Construction of the two-electron spin Hamiltonian, incorporating Zeeman interactions and the dominant hyperfine couplings for both the FAD•− and Trp•+ radicals. Open System Evolution: Integration of the Lindblad master equation to track the time evolution of the singlet and triplet state populations under biological decoherence channels (spin relaxation, environmental dephasing, and radical recombination). Quantum Fisher Information (QFI): Calculation of the symmetric logarithmic derivative and QFI to determine the fundamental angular sensitivity limits of the radical pair compass. Information Theory: Computation of the Shannon mutual information and channel capacity between the Earth's magnetic field orientation and the molecular signaling states.
Magnetic measurement can be performed by various sensors, such as SQUID and Giant Magnetoresistance. This device can achieve high accuracy while losing efficiency and convenience. The model of biological magnetic sensing in avian proposes a radical pair response to the external field on the FLY results in regulating animal behaviour. Inspired by the radical pair system found in biological system, the effect of intra-radical coupling and the initial condition is studied in this simplified radical pair model as the quantum advantage results from entanglement and superposition are investigated in metrology. To identify the sensing benefit from the cooperation between the radical pairs, the inter-radical coupling is considered. We find the intra-radical coupling determines the sensing regime while the coupled radical pair system enables a new sensing scheme that provides a more general and flexible way for magnetic sensing in a broader range through a easier manipulation to the system.