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arXiv:cond-mat/0104188

Photon Counting Statistics for Single Molecule Spectroscopy

Eli Barkai, YounJoon Jung, R. Silbey

Published Apr 11, 2001• 0 citations
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Abstract

We present a general relation between Mandel's $Q$ parameter describing variance of number of photons emitted from a single molecule and a three time correlation function describing a spectral diffusion process the molecule is undergoing. For a prototype of such a stochastic process an exact solution is found which exhibits rich types of physical behaviors.

DOI
10.48550/arxiv.cond-mat/0104188

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The Journal of Chemical Physics•May 4, 2015•1 citation
We present a general relation between Mandel's QQQ parameter describing variance of number of photons emitted from a single molecule and a three time correlation function describing a spectral diffusion process the molecule is undergoing. For a prototype of such a stochastic process an exact solution is found which exhibits rich types of physical behaviors.
A theory is formulated for time dependent fluctuations of the spectrum of a single molecule in a dynamic environment. In particular, we investigate the photon counting statistics of a single molecule undergoing a spectral diffusion process. Based on the stochastic optical Bloch equation, fluctuations are characterized by Mandel's QQQ parameter yielding the variance of number of emitted photons and the second order intensity correlation function, g(2)(t)g^{(2)}(t)g(2)(t). Using a semi-classical approach and linear response theory, we show that the QQQ parameter can be described by a three-time dipole correlation function. This approach gene ralizes the Wiener-Khintchine formula that gives the average number of fluorescent photons in terms of a one-time dipole correlation function. We classify the time ordering properties of the three-time dipole correlation function, and show that it can be represented by three different pulse shape functions similar to those used in the context of nonlinear spectroscopy. An exact solution is found for a single molecule whose absorption frequency undergoes a two state random telegraph process (i.e., the Kubo-Anderson sudden jump process.) Simple expressions are obtained from the exact solution in the slow and fast modulation regimes based on appropriate approximations for each case. In the slow modulation regime QQQ can be large even in the long time limit, while in the fast modulation regime it becomes small.
We develop the theory of nonlinear spectroscopy for a single molecule undergoing stochastic dynamics and interacting with a sequence of two laser pulses. We find general expressions for the photon counting statistics and the exact solution to the problem for the Kubo-Anderson process. In the limit of impulsive pulses the information on the photon statistics is contained in the molecule's dipole correlation function. The selective limit, the semiclassical approximation, and the fast modulation limit exhibit rich general behaviors of this new type of spectroscopy. We show how the design of external fields leads to insights on ultrafast dynamics of individual molecules that are different from those found for an ensemble.
A general theory and calculation framework for the prediction of frequency-resolved single molecule photon counting statistics is presented. Expressions for the generating function of photon counts are derived, both for the case of naive "detection" based solely on photon emission from the molecule and also for experimentally realizable detection of emitted photons, and are used to explicitly calculate low-order photon-counting moments. The two cases of naive detection versus physical detection are compared to one another and it is demonstrated that the physical detection scheme resolves certain inconsistencies predicted via the naive detection approach. Applications to two different models for molecular dynamics are considered: a simple two-level system and a two-level absorber subject to spectral diffusion.