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Journal of Chemical Theory and Computation

Accurate Vibrational Frequency Calculations for Quantum Computing via an Analytic Second-Order Energy Derivative Framework

Juntao Lai, Qiang Fu, Zhenyu Li, Jinlong Yang

Published Apr 17, 2026• 0 citations
Publisher

Abstract

Quantum computing has emerged as a promising paradigm for tackling electronic structure problems, with most efforts to date focused on molecular energies and, more recently, first-order derivatives. However, the extension to second-order energy derivatives with respect to nuclear coordinates─essential for predicting vibrational spectra and identifying transition states─has remained relatively limited. Here, we present an analytic implementation for computing nuclear Hessians within the variational quantum eigensolver framework. Our approach produces harmonic vibrational frequencies and normal modes in excellent agreement with full configuration interaction (FCI) benchmarks, even for systems with challenging cases of orbital degeneracy or involving weak intermolecular interactions. We further assess the quantum measurement cost of these second-order derivative calculations and compare it with that of variational quantum eigensolver (VQE) energy calculations. Additionally, we demonstrate how point group symmetry can be incorporated to reduce measurement cost without loss of accuracy. This work extends quantum computing capabilities toward advanced quantum chemical simulations, such as the characterization of noncovalent interactions via low-frequency vibrational signatures and the identification of transition states.

DOI
10.1021/acs.jctc.5c01768

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Quantum computing has emerged as a promising paradigm for tackling electronic structure problems, with most efforts to date focused on molecular energies and, more recently, first-order derivatives. However, the extension to second-order energy derivatives with respect to nuclear coordinates─essential for predicting vibrational spectra and identifying transition states─has remained relatively limited. Here, we present an analytic implementation for computing nuclear Hessians within the variational quantum eigensolver framework. Our approach produces harmonic vibrational frequencies and normal modes in excellent agreement with full configuration interaction (FCI) benchmarks, even for systems with challenging cases of orbital degeneracy or involving weak intermolecular interactions. We further assess the quantum measurement cost of these second-order derivative calculations and compare it with that of variational quantum eigensolver (VQE) energy calculations. Additionally, we demonstrate how point group symmetry can be incorporated to reduce measurement cost without loss of accuracy. This work extends quantum computing capabilities toward advanced quantum chemical simulations, such as the characterization of noncovalent interactions via low-frequency vibrational signatures and the identification of transition states.
First-order derivatives of energies with respect to atomic coordinates are widely computed and used in quantum chemistry simulations. The rapidly emerging technology of quantum computing offers a new paradigm for solving relevant quantum chemistry equations. In this work, we have achieved analytical calculations of atomic forces based on the Hellmann-Feynman theorem within the framework of the variational quantum eigensolver. The accuracy of the approach is demonstrated by calculating the atomic forces of H2, LiH, H2O, and NH3 molecules, which are in excellent agreement with values obtained from full configuration interaction calculations. In particular, for systems with degenerate molecular orbitals, the analytical approach has a significant accuracy advantage over finite-difference-based methods and will not involve additional computational effort on a quantum computer. The calculated forces are further used to optimize the geometries of NH3 and CH4 molecules and to perform ab initio molecular dynamics simulations for the umbrella inversion of NH3, demonstrating the feasibility of the approach in practical quantum chemistry simulations.
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Nuclear gradients and Hessians are fundamental quantities in computational chemistry, essential for a wide range of applications including geometry optimization, vibrational spectroscopy, and molecular property calculations. In this work, we present their analytical implementation on quantum hardware. The methodology is formulated within an active-space framework combining orbital optimization and linear-response theory. On the quantum-computing side, the approach employs the tiled unitary product state (tUPS) ansatz to directly evaluate the tensor elements required for solving the response equations. Moreover, the expectation values are corrected using an adapted confusion-matrix error-mitigation scheme in combination with post-selection criteria. The resulting workflow is assessed on molecular hydrogen and on water through the calculation of potential energy surfaces, nuclear gradients, Hessians, and vibrational frequencies, enabling the evaluation of both its capabilities and current limitations. The results demonstrate good performance for the hydrogen molecule, whereas the water molecule provides a more demanding test of quantum-hardware resources and highlights the trade-offs associated with error-mitigation strategies. The quantified analysis of the results identify the main sources of errors, suggesting improvement directions for more accurate quantum computer applications.
Quantum computers offer the potential to simulate chemical systems beyond the capabilities of classical computers. However, current quantum computing approaches to ab initio molecular dynamics (AIMD) and vibrational analysis largely rely on the Variational Quantum Eigensolver (VQE), whose circuit depth, iterative optimization, and measurement overhead hinder the practical simulation of molecular systems. Here, we extend Sample-based Quantum Diagonalization (SQD), a quantum sampling-based electronic-structure method, to AIMD and vibrational analysis on noisy quantum hardware. The resulting framework enables nuclear forces and Hessians to be derived from quantum-computed electronic energies, facilitating molecular dynamics and characterization of potential energy surfaces. We demonstrate the approach using diverse molecular processes, including H2 bond vibration, the proton-exchange reaction (H+ + H2), the bimolecular nucleophilic substitution (SN2) reaction (Cl- + CH3Cl), and proton-transfer dynamics between two water molecules involving transient formation of the Zundel cation (H2O···H+···OH2). Across these systems, SQD-AIMD trajectories and vibrational frequencies obtained with noisy quantum hardware/noise-models show excellent agreement with classical reference calculations and substantially improved accuracy relative to previously reported VQE-based simulations. Importantly, the SQD-based approach eliminates costly variational optimization and significantly reduces measurement requirements relative to VQE, enabling AIMD simulations spanning approximately 500 timesteps (∼200 fs), substantially longer than previously reported AIMD simulations on quantum hardware. These results establish SQD-AIMD and SQD-vibrational analysis as practical and scalable frameworks for simulating chemical reaction dynamics and elucidating reaction mechanisms on near-term quantum hardware, extending quantum computing applications beyond static electronic structure calculations.
We develop a quantum-classical hybrid algorithm to calculate the analytical second-order derivative of the energy for the orbital-optimized variational quantum eigensolver (OO-VQE), which is a method to calculate eigenenergies of a given molecular Hamiltonian by utilizing near-term quantum computers and classical computers. We show that all quantities required in the algorithm to calculate the derivative can be evaluated on quantum computers as standard quantum expectation values without using any ancillary qubits. We validate our formula by numerical simulations of quantum circuits for computing the polarizability of the water molecule, which is the second-order derivative of the energy, with respect to the electric field. Moreover, the polarizabilities and refractive indices of thiophene and furan molecules are calculated as a test bed for possible industrial applications. We finally analyze the error scaling of the estimated polarizabilities obtained by the proposed analytical derivative versus the numerical derivative obtained by the finite difference. Numerical calculations suggest that our analytical derivative requires fewer measurements (runs) on quantum computers than the numerical derivative to achieve the same fixed accuracy.
Variational quantum algorithms on bosonic quantum processors are an emerging paradigm for quantum chemistry calculations, exploiting the natural alignment between molecular structure and harmonic oscillator-based hardware. We introduce the qumode-based variational quantum deflation framework (QumVQD) for finding both electronic and vibrational excited state energies on qumode-based architectures. We validate the approach through electronic structure calculations on H2_{\text{2}}2​ and linear H4_{\text{4}}4​, where we introduce Hamming-weight filtering of the Fock basis to enforce particle number conservation and eliminate spurious eigenstates by reducing the required Hilbert space, which reduces the required number of qumodes in turn. We achieve agreement with full configuration interaction (FCI) using the STO-3G basis set within the chemical accuracy threshold at most points along the potential energy surfaces. Extending to the vibrational structure, we combine QumVQD with an existing Hamiltonian fragmentation approach based on Cartan subalgebra, allowing us to compute the vibrational eigenenergies of CO2_{\text{2}}2​ and H2_{\text{2}}2​S to spectroscopic accuracy with per-fragment circuits that scale as O(N)O(N)O(N) in single-qumode gates and O(N2)O(N^2)O(N2) in beam-splitter gates for NNN qumodes. For the case of CO2_{\text{2}}2​, we get total gate counts more than an order of magnitude smaller than those reported for qubit-based vibrational algorithms at this system size. These results demonstrate that bosonic quantum devices are a viable platform for excited-state quantum chemistry, particularly for vibrational problems where qubit-based methods incur substantial boson-to-qubit mapping overhead.