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Fault-tolerant operation and materials science with neutral atom logical qubits

Woo Chang Chung, Daniel C. Cole, Pranav Gokhale, Eric B. Jones, Kevin W. Kuper, David Mason, Victory Omole, A. G. Radnaev, Rich Rines, Mariesa H. Teo, Matt J. Bedalov, Matt Blakely, Peter. D. Buttler, Caitlin Carnahan, Frederic T. Chong, Palash Goiporia, Bettina Heim, Garrett Hickman, Ryan Jones, Pradnya Khalate, Jin-Sung Kim, Martin Lichtman, Stephanie Lee, Nathan A. Neff-Mallon, Thomas W. Noel, Mark E. Saffman, Efrat Shabtai, Bharath Thotakura, Teague Tomesh, Angela K. Tucker

Published Dec 5, 2025• 8 citations
Publisher

Abstract

Abstract We report on the fault-tolerant operation of logical qubits on a neutral atom quantum computer, with logical performance surpassing physical performance for multiple circuits including Bell state preparation (12x error reduction), random circuits (15x), and a prototype Anderson Impurity Model ground state solver for materials science applications (up to 6x, non-fault-tolerantly). The logical qubits are implemented via the [[4, 2, 2]] code (C 4 ). Our work constitutes the first complete realization of the benchmarking protocol proposed by Gottesman 2016 demonstrating results consistent with fault tolerance. In light of recent advances on applying concatenated C 4 /C 6 detection codes to achieve error correction with high code rates and thresholds, our work can be regarded as a building block towards a practical scheme for fault tolerant quantum computation. Our demonstration of a materials science application with logical qubits particularly demonstrates the immediate value of these techniques on current experiments.

DOI
10.1038/s41534-025-01095-w

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Abstract We report on the fault-tolerant operation of logical qubits on a neutral atom quantum computer, with logical performance surpassing physical performance for multiple circuits including Bell state preparation (12x error reduction), random circuits (15x), and a prototype Anderson Impurity Model ground state solver for materials science applications (up to 6x, non-fault-tolerantly). The logical qubits are implemented via the [[4, 2, 2]] code (C 4 ). Our work constitutes the first complete realization of the benchmarking protocol proposed by Gottesman 2016 demonstrating results consistent with fault tolerance. In light of recent advances on applying concatenated C 4 /C 6 detection codes to achieve error correction with high code rates and thresholds, our work can be regarded as a building block towards a practical scheme for fault tolerant quantum computation. Our demonstration of a materials science application with logical qubits particularly demonstrates the immediate value of these techniques on current experiments.
We report on the fault-tolerant operation of logical qubits on a neutral atom quantum computer, with logical performance surpassing physical performance for multiple circuits including Bell states (12x error reduction), random circuits (15x), and a prototype Anderson Impurity Model ground state solver for materials science applications (up to 6x, non-fault-tolerantly). The logical qubits are implemented via the [[4, 2, 2]] code (C4). Our work constitutes the first complete realization of the benchmarking protocol proposed by Gottesman 2016 [1] demonstrating results consistent with fault-tolerance. In light of recent advances on applying concatenated C4/C6 detection codes to achieve error correction with high code rates and thresholds, our work can be regarded as a building block towards a practical scheme for fault tolerant quantum computation. Our demonstration of a materials science application with logical qubits particularly demonstrates the immediate value of these techniques on current experiments.
Quantum error correction (QEC) [1,2] is essential for the realization of large-scale quantum computers [3,4]. However, due to the complexity of operating on the encoded ‘logical’ qubits [5,6], understanding the physical principles for building fault-tolerant quantum devices and combining them into efficient architectures is an outstanding scientific challenge. Here we utilize reconfigurable arrays of up to 448 neutral atoms to implement the key elements of a universal, fault-tolerant quantum processing architecture and experimentally explore their underlying working mechanisms. We first employ surface codes to study how repeated QEC suppresses errors [6,7], demonstrating 2.14(13)x below-threshold performance in a four-round characterization circuit by leveraging atom loss detection and machine learning decoding [8,9]. We then investigate logical entanglement using transversal gates and lattice surgery [10–12], and extend it to universal logic through transversal teleportation with 3D [[15,1,3]] codes [13,14], enabling arbitrary-angle synthesis with polylogarithmic overhead [5,15]. Finally, we develop mid-circuit qubit re-use [16], increasing experimental cycle rates by two orders of magnitude and enabling deep-circuit protocols with dozens of logical qubits and hundreds of logical teleportations [17–20] with [[7,1,3]] and high-rate [[16,6,4]] codes while maintaining constant internal entropy. Our experiments reveal key principles for efficient architecture design, involving the interplay between quantum logic & entropy removal, judiciously using physical entanglement in logic gates & magic state generation, and leveraging teleportations for universality & physical qubit reset. These results establish foundations for scalable, universal error-corrected processing and its practical implementation with neutral atom systems.
Quantum error correction protects fragile quantum information by encoding it into a larger quantum system. These extra degrees of freedom enable the detection and correction of errors, but also increase the operational complexity of the encoded logical qubit. Fault-tolerant circuits contain the spread of errors while operating the logical qubit, and are essential for realizing error suppression in practice. While fault-tolerant design works in principle, it has not previously been demonstrated in an error-corrected physical system with native noise characteristics. In this work, we experimentally demonstrate fault-tolerant preparation, measurement, rotation, and stabilizer measurement of a Bacon-Shor logical qubit using 13 trapped ion qubits. When we compare these fault-tolerant protocols to non-fault tolerant protocols, we see significant reductions in the error rates of the logical primitives in the presence of noise. The result of fault-tolerant design is an average state preparation and measurement error of 0.6% and a Clifford gate error of 0.3% after error correction. Additionally, we prepare magic states with fidelities exceeding the distillation threshold, demonstrating all of the key single-qubit ingredients required for universal fault-tolerant operation. These results demonstrate that fault-tolerant circuits enable highly accurate logical primitives in current quantum systems. With improved two-qubit gates and the use of intermediate measurements, a stabilized logical qubit can be achieved.
Quantum computing has reached a pivotal inflection point with the recent demonstration ofbelow-threshold quantum error correction and the emergence of logical qubits that outperformtheir physical counterparts. This review synthesizes the remarkable progress achieved between2024 and 2026 across multiple quantum hardware platforms, including superconducting circuits,trapped ions, and neutral atom arrays. We examine the theoretical foundations of quantumerror correction codes, with particular emphasis on surface codes and the rapidly advancingquantum low-density parity-check (qLDPC) codes. Key experimental milestones are analyzed,including Google’s Willow chip demonstration of exponential error suppression, IBM’s modularfault-tolerant roadmap culminating in the Starling system, IonQ’s achievement of 48 logicalqubits with a 2:1 encoding ratio, and QuEra’s record-efficiency neutral atom error correctionapproaching the Teraquop regime. The review further explores critical enabling technologiessuch as real-time decoding architectures, magic state distillation protocols, and fault-tolerant gateimplementations. We discuss the remaining challenges in scaling to hundreds of logical qubits,achieving practical logical error rates of 10−10 to 10−15, and realizing end-to-end fault-tolerantalgorithms. By synthesizing these developments, this article provides a comprehensive assessmentof the field’s trajectory toward practical fault-tolerant quantum computing and identifies the keymilestones that will define the next phase of progress.
Quantum computing experiments are transitioning from running on physical qubits to using encoded, logical qubits. Fault-tolerant computation can identify and correct errors, and has the potential to enable the dramatically reduced logical error rates required for valuable algorithms. However, it requires flexible control of high-fidelity operations performed on large numbers of qubits. We demonstrate fault-tolerant quantum computation on a quantum processor with 256 qubits, each an individual neutral Ytterbium atom. The operations are designed so that key error sources convert to atom loss, which can be detected by imaging. Full connectivity is enabled by atom movement. We demonstrate the entanglement of 24 logical qubits encoded into 48 atoms, at once catching errors and correcting for, on average 1.8, lost atoms. We also implement the Bernstein-Vazirani algorithm with up to 28 logical qubits encoded into 112 atoms, showing better-than-physical error rates. In both cases, "erasure conversion," changing errors into a form that can be detected independently from qubit state, improves circuit performance. These results begin to clear a path for achieving scientific quantum advantage with a programmable neutral atom quantum processor.
Simulating the dynamics of electrons and other fermionic particles in quantum chemistry, materials science, and high-energy physics is one of the most promising applications of fault-tolerant quantum computers. However, the overhead in mapping time evolution under fermionic Hamiltonians to qubit gates renders this endeavor challenging. We introduce fermionic fault-tolerant quantum computing, a framework which removes this overhead altogether. Using native fermionic operations we first construct a repetition code which corrects phase errors only. Within a fermionic color code, which corrects for both phase and loss errors, we then realize a universal fermionic gate set, including transversal fermionic Clifford gates. Interfacing with qubit color codes we introduce qubit-fermion fault-tolerant computation, which allows for qubit-controlled fermionic time evolution, a crucial subroutine in state-of-the-art quantum algorithms. As an application, we consider simulating crystalline materials, finding an exponential improvement in circuit depth for a single time step from O(N)\mathcal{O}(N)O(N) to O(log⁡(N))\mathcal{O}(\log(N))O(log(N)) with respect to lattice site number NNN while retaining a site count of O~(N)\tilde{\mathcal{O}}(N)O~(N), implying a linear-in-NNN end-to-end gate depth for simulating materials, as opposed to quadratic in previous approaches. We also introduce a fermion-inspired qubit algorithm with O(log(N)O(\mathrm{log}(N)O(log(N) depth, but a prohibitive number of additional ancilla qubits. We show how our framework can be implemented in neutral atoms, overcoming the apparent inability of neutral atoms to implement non-number-conserving gates. Our work opens the door to fermion-qubit fault-tolerant quantum computation in platforms with native fermions such as neutral atoms, quantum dots and donors in silicon, with applications in quantum chemistry, material science, and high-energy physics.