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Journal of Computing and Information Science in Engineering

Computing a Sparse Approximate Inverse on Quantum Annealing Machines

Sanjay Suresh, Krishnan Suresh

Published Dec 4, 2025• 0 citations
Publisher

Abstract

Abstract Many engineering problems involve solving large linear systems of equations. Conjugate gradient (CG) is one of the most popular iterative methods for solving such systems. CG typically requires a good preconditioner to speed up convergence, and computing these preconditioners can be challenging. In this article, we demonstrate that a particular preconditioner, namely, sparse approximate inverse (SPAI), can be computed efficiently using quantum annealing machines. Specifically, we provide an extension of the box algorithm for computing the SPAI of large matrices on D-Wave Advantage machines. The computation of an SPAI reduces to solving a series of quadratic unconstrained binary optimization (QUBO) problems. This is demonstrated using several poorly conditioned linear systems arising from a 2D finite-difference formulation of the Poisson problem.

DOI
10.1115/1.4070578

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Abstract Many engineering problems involve solving large linear systems of equations. Conjugate gradient (CG) is one of the most popular iterative methods for solving such systems. CG typically requires a good preconditioner to speed up convergence, and computing these preconditioners can be challenging. In this article, we demonstrate that a particular preconditioner, namely, sparse approximate inverse (SPAI), can be computed efficiently using quantum annealing machines. Specifically, we provide an extension of the box algorithm for computing the SPAI of large matrices on D-Wave Advantage machines. The computation of an SPAI reduces to solving a series of quadratic unconstrained binary optimization (QUBO) problems. This is demonstrated using several poorly conditioned linear systems arising from a 2D finite-difference formulation of the Poisson problem.
Abstract Many engineering problems involve solving large linear systems of equations. Conjugate gradient (CG) is one of the most popular iterative methods for solving such systems. However, CG typically requires a good preconditioner to speed up convergence. One such preconditioner is the sparse approximate inverse (SPAI). In this paper, we explore the computation of an SPAI on quantum annealing machines by solving a series of quadratic unconstrained binary optimization (QUBO) problems. Numerical experiments are conducted using both well-conditioned and poorly-conditioned linear systems arising from a 2D finite difference formulation of the Poisson problem.
Many engineering problems involve solving large linear systems of equations. Conjugate gradient (CG) is one of the most popular iterative methods for solving such systems. However, CG typically requires a good preconditioner to speed up convergence. One such preconditioner is the sparse approximate inverse (SPAI). In this paper, we explore the computation of an SPAI on quantum annealing machines by solving a series of quadratic unconstrained binary optimization (QUBO) problems. Numerical experiments are conducted using both well-conditioned and poorly-conditioned linear systems arising from a 2D finite difference formulation of the Poisson problem.
Solving linear systems of equations is an important problem in engineering. Many quantum algorithms, such as the Harrow–Hassidim–Lloyd algorithm and the box algorithm, have been proposed for solving such systems. The focus of this article is on improving the efficiency of the box algorithm. The basic principle behind this algorithm is to transform the linear system into a series of quadratic unconstrained binary optimization (QUBO) problems, which are then solved on annealing machines. The computational efficiency of the box algorithm is entirely determined by the number of iterations, which, in turn, depends on the box contraction ratio, typically set to 0.5. Here, it is shown through theoretical analysis that a contraction ratio of 0.5 is sub-optimal and that a computational speed-up can be achieved with a contraction ratio of 0.2. This is confirmed through numerical experiments where a computational speed-up between 20% to 60% is observed when the optimal contraction ratio is used.
The quantum annealing devices, which encode the solution to a computational problem in the ground state of a quantum Hamiltonian, are implemented in D-Wave systems with more than 2,000 qubits. However, quantum annealing can solve only a classical combinatorial optimization problem such as an Ising model, or equivalently, a quadratic unconstrained binary optimization (QUBO) problem. In this paper, we formulate the QUBO model to solve elliptic problems with Dirichlet and Neumann boundary conditions using the finite element method. In this formulation, we develop the objective function of quadratic binary variables represented by qubits and the system finds the binary string combination minimizing the objective function globally. Based on the QUBO formulation, we introduce an iterative algorithm to solve the elliptic problems. We discuss the validation of the modeling on the D-Wave quantum annealing system.
Many quantum computing algorithms are being developed with the advent of quantum computers. Solving linear systems is one of the most fundamental problems in almost all of science and engineering. HHL algorithm, a monumental quantum algorithm for solving linear systems on the gate model quantum computers, was invented and several advanced variations have been developed. However, HHL-based algorithms have a lot of limitations in spite of their importance. We address solving linear systems on a D-Wave quantum annealing device. To formulate a quadratic unconstrained binary optimization (QUBO) model for a linear system solving problem, we make use of a linear least-square problem with binary representation of the solution. We validate this QUBO model on the D-Wave system and discuss the results.
Classical and quantum annealing are computing paradigms that have been proposed to solve a wide range of optimization problems. In this paper, we aim to enhance the performance of annealing algorithms by introducing the technique of degeneracy engineering, through which the relative degeneracy of the ground state is increased by modifying a subset of terms in the objective Hamiltonian. We illustrate this novel approach by applying it to the example of ${\ensuremath{\ell}}_{0}$-norm regularization for sparse linear regression, which is, in general, an NP\mathsf{NP}NP-hard optimization problem. Specifically, we show how to cast ${\ensuremath{\ell}}_{0}$-norm regularization as a quadratic unconstrained binary optimization (QUBO) problem, suitable for implementation on annealing platforms. As a case study, we apply this QUBO formulation to energy flow polynomials in high-energy collider physics, finding that degeneracy engineering substantially improves the annealing performance. Our results motivate the application of degeneracy engineering to a variety of regularized optimization problems.