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Journal of Chemical Theory and Computation

Graph-|Q⟩⟨C|, a Graph-Based Quantum/Classical Algorithm for Efficient Electronic Structure on Hybrid Quantum/Classical Hardware Systems: Improved Quantum Circuit Depth Performance

J. H. Zhang, Srinivasan S. Iyengar

Published Apr 12, 2022• 19 citations
Publisher

Abstract

We present a procedure to reduce the depth of quantum circuits and improve the accuracy of results in computing post-Hartree–Fock electronic structure energies in large molecular systems. The method is based on molecular fragmentation where a molecular system is divided into overlapping fragments through a graph-theoretic procedure. This allows us to create a set of projection operators that decompose the unitary evolution of the full system into separate sets of processes, some of which can be treated on quantum hardware and others on classical hardware. Thus, we develop a procedure for an electronic structure that can be asynchronously spawned onto a potentially large ensemble of classical and quantum hardware systems. We demonstrate this method by computing Unitary Coupled Cluster Singles and Doubles (UCCSD) energies for a set of [H 2 ] n clusters, with n ranging from 4 to 128. We implement our methodology using quantum circuits, and when these quantum circuits are processed on a quantum simulator, we obtain energies in agreement with the UCCSD energies in the milli-hartree energy range. We also show that our circuit decomposition approach yields up to 9 orders of magnitude reduction in the number of CNOT gates and quantum circuit depth for the large-sized clusters when compared to a standard quantum circuit implementation available on IBM’s Quantum Information Science kit, known as Qiskit.

DOI
10.1021/acs.jctc.1c01303

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We present a procedure to reduce the depth of quantum circuits and improve the accuracy of results in computing post-Hartree–Fock electronic structure energies in large molecular systems. The method is based on molecular fragmentation where a molecular system is divided into overlapping fragments through a graph-theoretic procedure. This allows us to create a set of projection operators that decompose the unitary evolution of the full system into separate sets of processes, some of which can be treated on quantum hardware and others on classical hardware. Thus, we develop a procedure for an electronic structure that can be asynchronously spawned onto a potentially large ensemble of classical and quantum hardware systems. We demonstrate this method by computing Unitary Coupled Cluster Singles and Doubles (UCCSD) energies for a set of [H 2 ] n clusters, with n ranging from 4 to 128. We implement our methodology using quantum circuits, and when these quantum circuits are processed on a quantum simulator, we obtain energies in agreement with the UCCSD energies in the milli-hartree energy range. We also show that our circuit decomposition approach yields up to 9 orders of magnitude reduction in the number of CNOT gates and quantum circuit depth for the large-sized clusters when compared to a standard quantum circuit implementation available on IBM’s Quantum Information Science kit, known as Qiskit.
The accurate determination of chemical properties is known to have a critical impact on multiple fundamental chemical problems but is deeply hindered by the steep algebraic scaling of electron correlation calculations and the exponential scaling of quantum nuclear dynamics. With the advent of new quantum computing hardware and associated developments in creating new paradigms for quantum software, this avenue has been recognized as perhaps one way to address exponentially complex challenges in quantum chemistry and molecular dynamics. In this paper, we discuss a new approach to drastically reduce the quantum circuit depth (by several orders of magnitude) and help improve the accuracy in the quantum computation of electron correlation energies for large molecular systems. The method is derived from a graph-theoretic approach to molecular fragmentation and enables us to create a family of projection operators that decompose quantum circuits into separate unitary processes. Some of these processes can be treated on quantum hardware and others on classical hardware in a completely asynchronous and parallel fashion. Numerical benchmarks are provided through the computation of unitary coupled-cluster singles and doubles (UCCSD) energies for medium-sized protonated and neutral water clusters using the new quantum algorithms presented here.
Recent experiments on quantum computers have challenged the limits of classical computation in chemistry, simulating ground states of strongly correlated molecules. Many of these experiments have utilized the unitary cluster Jastrow ansatz, a quantum circuit inspired by the unitary coupled cluster ansatz that can be tailored to current quantum hardware. Notably, the largest experiment in Sci. Adv. 11, 25 (2025) executed a quantum circuit with 77 qubits and 10,570 gates on an IBM quantum computer and performed classical post-processing with up to 6400 nodes on Fugaku to compute ground state energies better than Hartree-Fock. In this work, we present a polynomial time classical algorithm to compute the energy of any single-layer unitary cluster Jastrow circuit, independent of locality constraints for quantum hardware. Our algorithm can reproduce the largest experiment from Sci. Adv. 11, 25 (2025) in less than a minute on a laptop, and through circuit optimization enabled by fast simulation we achieve a lower ground state energy than the experiment.
In this work we investigate methods to improve the efficiency and scalability of quantum algorithms for quantum chemistry applications. We propose a transformation of the electronic structure Hamiltonian in the second quantization framework into the particle-hole picture, which offers a better starting point for the expansion of the system wave function. The state of the molecular system at study is parametrized so as to constrain the sampling of the corresponding wave function within the sector of the molecular Fock space that contains the desired solution. To this end, we explore different mapping schemes to encode the molecular ground state wave function in a quantum register. Taking advantage of known post-Hartree-Fock quantum chemistry approaches and heuristic Hilbert space search quantum algorithms, we propose a new family of quantum circuits based on exchange-type gates that enable accurate calculations while keeping the gate count (i.e., the circuit depth) low. The particle-hole implementation of the unitary coupled-cluster (UCC) method within the variational quantum eigensolver approach gives rise to an efficient quantum algorithm, named q-UCC, with important advantages compared to the straightforward translation of the classical coupled-cluster counterpart. In particular, we show how a single Trotter step in the expansion of the system wave function can accurately and efficiently reproduce the ground-state energy of simple molecular systems.
One of the most important application areas of molecular quantum chemistry is the study and prediction of chemical reactivity. Large-scale, fully error-tolerant quantum computers could provide exact or near-exact solutions to the underlying electronic structure problem with exponentially less effort than a classical computer thus enabling highly accurate predictions for comparably large molecular systems. In the nearer future, however, only “noisy” devices with a limited number of qubits that are subject to decoherence will be available. For such near-term quantum computers the hybrid quantum-classical variational quantum eigensolver algorithm in combination with the unitary coupled-cluster ansatz (UCCSD-VQE) [Peruzzo et al. Nat. Commun. 2014, 5, 4213 and McClean et al. New J. Phys. 2016, 18, 023023] has become an intensively discussed approach that could provide accurate results before the dawn of error-tolerant quantum computing. In this work we present an implementation of UCCSD-VQE that allows for the first time to treat both open- and closed-shell molecules. We study the accuracy of the obtained energies for nine small molecular systems as well as for four exemplary chemical reactions by comparing to well-established electronic structure methods like (nonunitary) coupled-cluster and density functional theory. Finally, we roughly estimate the required quantum hardware resources to obtain “useful” results for practical purposes.
We present a large-scale experimental study of quantum-computing-based molecular simulation carried out on IQM's Sirius 24-qubit superconducting processor, utilizing up to 16 operational qubits. The work employs Sample-based Quantum Diagonalization (SQD) together with the Local Unitary Cluster Jastrow (LUCJ) ansatz to estimate ground-state energies for a set of benchmark molecules, including H2_22​, LiH, BeH2_22​, H2_22​O, and NH3_33​. In addition, we introduce a Linear-CNOT variant of the Unitary Coupled-Cluster Singles and Doubles (LCNot-UCCSD) ansatz within the SQD workflow, trading higher circuit depth for reduced classical preprocessing. A comparison between these ansätze is provided, clarifying their respective strengths, limitations, and suitability for near-term quantum hardware. We further explore potential energy landscapes through 1D scans for H2_22​ and HeH+^++ using both STO-3G and 6-31G basis sets, and for LiH and BeH2_22​ in STO-3G. Extending beyond this, we demonstrate the experimental construction of a full 2D potential energy surface for the water molecule on quantum hardware, mapped over a 32 ×\times× 32 grid in bond length and bond angle. To move beyond small benchmark systems, we combine SQD(LUCJ) with Density Matrix Embedding Theory (DMET) to compute active-space energies for a set of ligand-like molecules, as well as the pharmacologically relevant amantadine system. Across all studies, the majority of quantum-computed energies agree with reference FCI results, as well as with DMET-CASCI energies for embedded systems, to within chemical accuracy for the chosen basis sets. These results demonstrate the reliability of sample-based diagonalization approaches and underscore the potential of hybrid embedding strategies for extending quantum simulations to increasingly complex molecular systems, while also highlighting their practicality on current IQM quantum hardware.
Simulation of electronic structure is one of the most promising applications on noisy intermediate-scale quantum (NISQ) era devices. However, NISQ devices suffer from a number of challenges like limited qubit connectivity, short coherence times, and sizable gate error rates. Thus, desired quantum algorithms should require shallow circuit depths and low qubit counts to take advantage of these devices. Here, we attempt to reduce quantum resource requirements for molecular simulations on a quantum computer while maintaining the desired accuracy with the help of classical quantum chemical theories of canonical transformation and explicit correlation. In this work, compact ab initio Hamiltonians are generated classically, in the second quantized form, through an approximate similarity transformation of the Hamiltonian with (a) an explicitly correlated two-body unitary operator with generalized pair excitations that remove the Coulombic electron-electron singularities from the Hamiltonian and (b) a unitary one-body operator to efficiently capture the orbital relaxation effects required for accurate description of the excited states. The resulting transcorrelated Hamiltonians are able to describe both the ground and the excited states of molecular systems in a balanced manner. Using the variational quantum eigensolver (VQE) method based on the unitary coupled cluster with singles and doubles (UCCSD) ansatz and only a minimal basis set (ANO-RCC-MB), we demonstrate that the transcorrelated Hamiltonians can produce ground state energies comparable to the reference CCSD energies with the much larger cc-pVTZ basis set. This leads to a reduction in the number of required CNOT gates by more than 3 orders of magnitude for the chemical species studied in this work. Furthermore, using the quantum equation of motion (qEOM) formalism in conjunction with the transcorrelated Hamiltonian, we are able to reduce the deviations in the excitation energies from the reference EOM-CCSD/cc-pVTZ values by an order of magnitude. The transcorrelated Hamiltonians developed here are Hermitian and contain only one- and two-body interaction terms and thus can be easily combined with any quantum algorithm for accurate electronic structure simulations.