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Springer series on fluorescence

Photon Antibunching in Single Molecule Fluorescence Spectroscopy

Kristin S. Grußmayer, Dirk‐Peter Herten

Published Jan 1, 2014• 10 citations
Publisher
DOI
10.1007/4243_2014_71

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We present an optical technique, called AB/FCS-fingerprinting, capable of characterizing fluorophore independence in aqueous solution using two-photon excitation microscopy and time-correlated single photon counting. Fluorescence correlation spectroscopy (FCS) is used to monitor fluctuations in the intensity of emissions. Auto- or cross-correlation analysis of these fluctuations can measure the average number of fluorescent molecules in an aqueous sample. Photon antibunching (AB) is observed from single quantum entities, which can emit only one photon at a time. By recording the number of coincident photons detected as a function of time between photon detections, AB analysis is used to determine the number of independent emitters in a sample. In AB/FCS-fingerprinting, the number of independent emitters in a sample is compared with the average number of fluorescent molecules in the same sample using a microscope that can be rapidly reconfigured to measure either AB or FCS from serial dilutions of a florescent sample. Since the number of fluorescent molecules is not necessarily equal to the number of independent emitters, a comparison of these values can provide insight into the independence of fluorophores in molecular assemblies. We validated this technique by measuring AB/FCS-fingerprinting of serial dilutions of mVenus, mNeonGreen, and an organic fluorophore, Alexa-Fluor-488. Experimental results were in good agreement with Monte-Carlo antibunching simulations for a single quantum emitter and with the predictions of a zero-truncated Poisson distribution model for photon antibunching from monomeric fluorophores in solution.
We introduce a new algorithm for computing correlations of photon arrival time data acquired in single-molecule fluorescence spectroscopy and fluorescence correlation spectroscopy (FCS). The algorithm is based on rewriting the correlation as a counting operation on photon pairs and can be used with arbitrary bin widths and spacing. The flexibility of the algorithm is demonstrated by use of FCS simulations and single-molecule photon antibunching experiments. Execution speed is comparable to the commonly used multiple-tau correlation technique. Wide bin spacings are possible that allow for real-time software calculation of correlations, even for high count rates.