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arXiv:2607.20513

Magnetosensitivity of amphibian morphological pigmentation is light- and eye-dependent and consistent with the radical pair mechanism

Hadi Zadeh-Haghighi, Gabriel E. Bertolesi, Sarah McFarlane, Christoph Simon

physics.bio-phq-bio.TOquant-phSubmitted Jul 7, 2026• Announced Jul 8, 2026
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Abstract

Weak magnetic fields influence a wide range of biological processes, yet the underlying mechanisms are poorly understood. The radical pair mechanism (RPM), which involves quantum spin dynamics, is a leading hypothesis. Here we show that weak magnetic fields modulate morphological pigmentation -- specifically, the number of perioptic melanophores -- in Xenopus laevis tadpoles in a field-strength-dependent manner. The response is light- and eye-dependent. The observed field-strength dependence is quantitatively consistent with a radical pair model. These properties are reminiscent of the light-dependent magnetoreception that is thought to operate in migratory birds, and establish amphibian pigmentation as a tractable vertebrate system for the study of radical-pair quantum biology.

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Magnetic effects in biology: Crucial role of quantum coherence in the radical pair mechanism

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The spin-chemical radical pair mechanism (RPM) has emerged as a leading theory for explaining the biological effects of low-intensity magnetic fields. These intriguing effects occur when the quantum system of radicals is well isolated from the disturbing influence of the environment. In other words, these effects are closely related to the spin coherence relaxation time τ, but an explicit relationship has not yet been established. In our study, we found an analytical solution to the Liouville-Neumann equation for an open system made up of two electrons and one nucleus, considering minimal interactions while concentrating on spin relaxation and chemical kinetics. This solution, supported by numerical integration, highlights the crucial role of quantum coherence. A straightforward expression is proposed that describes the RPM effect as a function of τ, within the ranges of magnetic field strength H and rate κ of chemical kinetics relevant to magnetobiology. Our findings reveal that RPM effects become significant only when fundamental relation γHτ>1+κτ holds: it controls the magnitude of the effects, and it is consistent with the principles of spin chemistry. Additionally, by comparing our results with existing experimental data, we estimate that the plausible spin decoherence times in magnetosensitive radical pairs within cryptochromelike proteins range from units to tens of nanoseconds. The effects of radio-frequency magnetic fields at the nT level were also examined, taking into account decoherence. These effects turned out to be negligible and incapable of disrupting the RPM patterns. The role of the quantum Zeno effect in magnetobiology is inspected from the perspective of the τ dependence of the RPM effect.

Physical review. E•Jun 30, 2025•10 citations

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Radical pairs induced by light-driven reduction of cryptochrome protein constitute a spin dependent mechanism that is accompanied by an electric dipole moment and is found to be sensitive to external magnetic fields. In this research, to investigate for the further proof of such model, the simultaneous effect of the Earth's static magnetic field and the time-dependent magnetic field noise on the electric dipole moment of the radical pair has been studied within the quantum mechanical framework. The effect of the external magnetic field discussed in different angles regarding the Earth magnetic field within various frequencies and magnitudes. The sensitivity of the system behavior to the external magnetic field frequencies and magnitudes, vastly differs among the changes in the magnetic field angle to the Earth's static field. Furthermore, the sensitivity studied under the effect of the environmental noise. The relative spatial orientation of the two magnetic field components plays an important role in the time evolution of the electric dipole moment. Also, deeper discussions on specific relative orientations of the external magnetic fields, such as 24 degree, shows that the quantum model of radical pairs which is based on dipole moment, is in agreement with the results of the birds behavorial studies. These findings provide new insights into the sensitivity of the radical pair model to the combination of magnetic fields and may contribute to a comprehensive understanding of the phenomenon of magnetoreception and the advancement of bioinspired magnetic sensors.

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Quantum computing applications in diverse domains are emerging rapidly. Given the limitations of classical computing techniques, the peculiarity of quantum circuits, which can observe quantum phenomena such as superposition, entanglement, and quantum coherence, is remarkable. This capability enables them to achieve measurement sensitivities far beyond classical limits. Research on radical pair-based magnetoreception in migratory birds has been a focus area for quite some time. A quantum mechanics-based computing approach, thus unsurprisingly, identifies a scope of application. In this study, to observe the phenomenon, electron-nucleus spin quantum circuits for different geomagnetic fluxes have been simulated and run through IBM Qiskit quantum processing units with error mitigation techniques. The results of different quantum states are consistent, suggesting singlet-triplet mechanisms that can be emulated, resembling the environment-enabling flights of migratory birds through generations of the avian species. The four-qubit model emulating electron-nucleus systems mimicking the environmental complexity outcome shows the sensitiveness to change of magnetic flux index, high probability of singlet-triplet dynamics, and upholding radical pair model states by the purity of the sub-system and full system outcome of coherence, the hallmark of singlet state dominance. The work involved performing fifty quantum circuits for different magnetic field values, each with one thousand and twenty-four shots for measurement, either in the simulator or on real quantum hardware, and for two error mitigation techniques, preceded by a noise model of a simulator run.

arXiv:2504.12336•Apr 14, 2025•0 citations
Weak magnetic fields influence a wide range of biological processes, yet the underlying mechanisms are poorly understood. The radical pair mechanism (RPM), which involves quantum spin dynamics, is a leading hypothesis. Here we show that weak magnetic fields modulate morphological pigmentation -- specifically, the number of perioptic melanophores -- in Xenopus laevis tadpoles in a field-strength-dependent manner. The response is light- and eye-dependent. The observed field-strength dependence is quantitatively consistent with a radical pair model. These properties are reminiscent of the light-dependent magnetoreception that is thought to operate in migratory birds, and establish amphibian pigmentation as a tractable vertebrate system for the study of radical-pair quantum biology.
The spin-chemical radical pair mechanism (RPM) has emerged as a leading theory for explaining the biological effects of low-intensity magnetic fields. These intriguing effects occur when the quantum system of radicals is well isolated from the disturbing influence of the environment. In other words, these effects are closely related to the spin coherence relaxation time τ, but an explicit relationship has not yet been established. In our study, we found an analytical solution to the Liouville-Neumann equation for an open system made up of two electrons and one nucleus, considering minimal interactions while concentrating on spin relaxation and chemical kinetics. This solution, supported by numerical integration, highlights the crucial role of quantum coherence. A straightforward expression is proposed that describes the RPM effect as a function of τ, within the ranges of magnetic field strength H and rate κ of chemical kinetics relevant to magnetobiology. Our findings reveal that RPM effects become significant only when fundamental relation γHτ>1+κτ holds: it controls the magnitude of the effects, and it is consistent with the principles of spin chemistry. Additionally, by comparing our results with existing experimental data, we estimate that the plausible spin decoherence times in magnetosensitive radical pairs within cryptochromelike proteins range from units to tens of nanoseconds. The effects of radio-frequency magnetic fields at the nT level were also examined, taking into account decoherence. These effects turned out to be negligible and incapable of disrupting the RPM patterns. The role of the quantum Zeno effect in magnetobiology is inspected from the perspective of the τ dependence of the RPM effect.
Migratory birds detect the Earth’s magnetic field with remarkable precision using a quantum process in retinal cryptochrome proteins. We review the observational and experimental evidence supporting the radical-pair mechanism and propose a simple dynamical model that augments the standard radical-pair Hamiltonian with a minimal geometric protection term. This term is modulated by consecutive Fibonacci numbers whose ratios converge to the golden ratio ϕ = (1 + √5)/2 ≈ 1.618. Numerical integration and analytical fixed-point analysis show that the protection term naturally stabilizes singlet–triplet coherence lifetimes and optimizes magnetic sensitivity at geomagnetic field strengths and inclinations observed in nature. The model is fully classical, self-contained, and provides a new quantitative explanation for the robustness of avian magnetoreception. It offers the first empirical hint of a universal geometric principle governing quantum coherence in biological systems.
Radical pairs induced by light-driven reduction of cryptochrome protein constitute a spin dependent mechanism that is accompanied by an electric dipole moment and is found to be sensitive to external magnetic fields. In this research, to investigate for the further proof of such model, the simultaneous effect of the Earth's static magnetic field and the time-dependent magnetic field noise on the electric dipole moment of the radical pair has been studied within the quantum mechanical framework. The effect of the external magnetic field discussed in different angles regarding the Earth magnetic field within various frequencies and magnitudes. The sensitivity of the system behavior to the external magnetic field frequencies and magnitudes, vastly differs among the changes in the magnetic field angle to the Earth's static field. Furthermore, the sensitivity studied under the effect of the environmental noise. The relative spatial orientation of the two magnetic field components plays an important role in the time evolution of the electric dipole moment. Also, deeper discussions on specific relative orientations of the external magnetic fields, such as 24 degree, shows that the quantum model of radical pairs which is based on dipole moment, is in agreement with the results of the birds behavorial studies. These findings provide new insights into the sensitivity of the radical pair model to the combination of magnetic fields and may contribute to a comprehensive understanding of the phenomenon of magnetoreception and the advancement of bioinspired magnetic sensors.
Radical pairs are short-lived, spin-correlated intermediates that underpin processes in chemistry, biology, and emerging quantum technologies. Their behavior is governed by coupled electron-nuclear spin dynamics and is sensitive to weak magnetic fields, but full quantum treatments have been obstructed by the extreme computational cost of modeling many interacting spins. Here, this barrier is removed, demonstrating that open-system radical-pair dynamics can be resolved at nuclear-spin scales previously intractable, explicitly reaching regimes with tens of coupled nuclei and validated up to 60 spins. In biologically relevant flavin-tryptophan radical pairs, electron-transfer pathways and magnetic-field anisotropy are found to reshape spin evolution and, in turn, spin-selective reaction yields. The resulting directional responses expose a strong mechanistic link between the nuclear environment, magnetic geometry, and chemical outcome-a relationship central to hypotheses of avian magnetoreception and other magnetic-field effects in biology. This establishes a widely applicable simulation framework that removes a long-standing barrier in spin chemistry, quantum biology, and spin-based device science.
Radical pairs and the dynamics they undergo are prevalent in many chemical and biological systems. Specifically, it has been proposed that the radical-pair mechanism results from a relatively strong hyperfine interaction with its intrinsic nuclear spin environment. While the existence of this mechanism is undisputed, the nanoscale details remain to be experimentally shown. Here, we analyze the role of a quantum sensor in detecting the spin dynamics (non-Markovian) of individual radical pairs in the presence of a weak magnetic field. We show how quantum control methods can be used to set apart the dynamics of the radical-pair mechanism at various stages of the evolution. We expect these findings to have implications to the understanding of the physical mechanism in magnetoreception and other biochemical processes with a microscopic detail.
Quantum computing applications in diverse domains are emerging rapidly. Given the limitations of classical computing techniques, the peculiarity of quantum circuits, which can observe quantum phenomena such as superposition, entanglement, and quantum coherence, is remarkable. This capability enables them to achieve measurement sensitivities far beyond classical limits. Research on radical pair-based magnetoreception in migratory birds has been a focus area for quite some time. A quantum mechanics-based computing approach, thus unsurprisingly, identifies a scope of application. In this study, to observe the phenomenon, electron-nucleus spin quantum circuits for different geomagnetic fluxes have been simulated and run through IBM Qiskit quantum processing units with error mitigation techniques. The results of different quantum states are consistent, suggesting singlet-triplet mechanisms that can be emulated, resembling the environment-enabling flights of migratory birds through generations of the avian species. The four-qubit model emulating electron-nucleus systems mimicking the environmental complexity outcome shows the sensitiveness to change of magnetic flux index, high probability of singlet-triplet dynamics, and upholding radical pair model states by the purity of the sub-system and full system outcome of coherence, the hallmark of singlet state dominance. The work involved performing fifty quantum circuits for different magnetic field values, each with one thousand and twenty-four shots for measurement, either in the simulator or on real quantum hardware, and for two error mitigation techniques, preceded by a noise model of a simulator run.