Abstract Prediction of tautomers plays an essential role in computer-aided drug discovery. However, it remains a challenging task nowadays to accurately predict the canonical tautomeric form of a given drug-like molecule. Lack of extensive tautomer databases, most likely due to the difficulty in experimental studies, hampers the development of effective empirical methods for tautomer predictions. A more accurate estimation of the stable tautomeric form can be achieved by quantum chemistry calculations. Yet, the computational cost required prevents quantum chemistry calculation as a standard tool for tautomer prediction in computer-aided drug discovery. In this paper we propose a hybrid quantum chemistry-quantum computation workflow to efficiently predict the dominant tautomeric form. Specifically, we select active-space molecular orbitals based on quantum chemistry methods. Then we utilize efficient encoding methods to map the Hamiltonian onto quantum devices to reduce the qubit resources and circuit depth. Finally, variational quantum eigensolver (VQE) algorithms are employed for ground state estimation where hardware-efficient ansatz circuits are used. To demonstrate the applicability of our methodology, we perform experiments on two tautomeric systems: acetone and Edaravone, each having 52 and 150 spin-orbitals in the STO-3G basis set, respectively. Our numerical results show that their tautomeric state prediction agrees with the CCSD benchmarks. Moreover, the required quantum resources are efficient: in the example of Edaravone, we could achieve chemical accuracy with only eight qubits and 80 two-qubit gates.
Abstract Prediction of tautomers plays an essential role in computer-aided drug discovery. However, it remains a challenging task nowadays to accurately predict the canonical tautomeric form of a given drug-like molecule. Lack of extensive tautomer databases, most likely due to the difficulty in experimental studies, hampers the development of effective empirical methods for tautomer predictions. A more accurate estimation of the stable tautomeric form can be achieved by quantum chemistry calculations. Yet, the computational cost required prevents quantum chemistry calculation as a standard tool for tautomer prediction in computer-aided drug discovery. In this paper we propose a hybrid quantum chemistry-quantum computation workflow to efficiently predict the dominant tautomeric form. Specifically, we select active-space molecular orbitals based on quantum chemistry methods. Then we utilize efficient encoding methods to map the Hamiltonian onto quantum devices to reduce the qubit resources and circuit depth. Finally, variational quantum eigensolver (VQE) algorithms are employed for ground state estimation where hardware-efficient ansatz circuits are used. To demonstrate the applicability of our methodology, we perform experiments on two tautomeric systems: acetone and Edaravone, each having 52 and 150 spin-orbitals in the STO-3G basis set, respectively. Our numerical results show that their tautomeric state prediction agrees with the CCSD benchmarks. Moreover, the required quantum resources are efficient: in the example of Edaravone, we could achieve chemical accuracy with only eight qubits and 80 two-qubit gates.
Accurate prediction of molecular structures and properties is vital for chemistry; materials science, and drug discovery, yet classical electronic-structure methods often fail for strongly correlated systems, large basis sets, and complex potential-energy landscapes. Quantum technology encompassing quantum computing, quantum machine learning, and hybrid quantum classical strategies offers a fundamentally new paradigm by encoding many-electron wave functions directly on qubits and exploiting superposition and entanglement to explore exponentially large Hilbert spaces. This review synthesizes recent algorithmic and hardware advances relevant to molecular modelling, including the Variational Quantum Eigensolver (VQE), Quantum Phase Estimation (QPE), quantum unitary coupled-cluster (q-UCC) families, equation-of-motion and subspace methods for excited states, tensor-network hybrids, and quantum kernel and variational QML approaches. We examine noise-aware hybrid workflows, error-mitigation techniques, symmetry-preserving ansätze, and operator-factorization methods that reduce measurement and gate overhead. Representative applications are discussed: ground- and excited-state energy prediction, potential-energy surface mapping, geometry and transition-state optimization, spectroscopic property estimation (IR, UV–Vis, NMR, EPR), and reaction-dynamics scenarios where non-adiabatic effects and conical intersections dominate. Resource estimates and scaling analyses clarify current NISQ limitations qubit counts, circuit depth, shot complexity and delineate the roadmap to fault-tolerant QPE for chemical accuracy. We compare quantum approaches with classical baselines (DFT, CCSD (T), multireference methods), identifying domains where quantum methods already show promise (strong correlation, multi-reference dissociation, spin-state ordering) and where classical methods remain competitive. Finally, we highlight near-term industrial opportunities in drug design, catalysis, CO2 capture, and energy materials, and outline critical research directions: algorithmic reductions in measurement/precision cost, hardware improvements in fidelity and connectivity, scalable ansatz design, and integrated software stacks for reproducible hybrid simulations. Together, these developments indicate that while practical, large-scale quantum advantage for general chemistry remains future work, quantum technologies are rapidly maturing into powerful tools for targeted molecular problems that are intractable with existing classical techniques.
Simulation of electronic structure is one of the most promising applications on noisy intermediate-scale quantum (NISQ) era devices. However, NISQ devices suffer from a number of challenges like limited qubit connectivity, short coherence times, and sizable gate error rates. Thus, desired quantum algorithms should require shallow circuit depths and low qubit counts to take advantage of these devices. Here, we attempt to reduce quantum resource requirements for molecular simulations on a quantum computer while maintaining the desired accuracy with the help of classical quantum chemical theories of canonical transformation and explicit correlation. In this work, compact ab initio Hamiltonians are generated classically, in the second quantized form, through an approximate similarity transformation of the Hamiltonian with (a) an explicitly correlated two-body unitary operator with generalized pair excitations that remove the Coulombic electron-electron singularities from the Hamiltonian and (b) a unitary one-body operator to efficiently capture the orbital relaxation effects required for accurate description of the excited states. The resulting transcorrelated Hamiltonians are able to describe both the ground and the excited states of molecular systems in a balanced manner. Using the variational quantum eigensolver (VQE) method based on the unitary coupled cluster with singles and doubles (UCCSD) ansatz and only a minimal basis set (ANO-RCC-MB), we demonstrate that the transcorrelated Hamiltonians can produce ground state energies comparable to the reference CCSD energies with the much larger cc-pVTZ basis set. This leads to a reduction in the number of required CNOT gates by more than 3 orders of magnitude for the chemical species studied in this work. Furthermore, using the quantum equation of motion (qEOM) formalism in conjunction with the transcorrelated Hamiltonian, we are able to reduce the deviations in the excitation energies from the reference EOM-CCSD/cc-pVTZ values by an order of magnitude. The transcorrelated Hamiltonians developed here are Hermitian and contain only one- and two-body interaction terms and thus can be easily combined with any quantum algorithm for accurate electronic structure simulations.
The variational quantum eigensolver (VQE) is a hybrid quantum-classical algorithm designed for noisy intermediate-scale quantum (NISQ) hardware to estimate eigenvalues of many-body Hamiltonians. Unlike fully quantum approaches such as quantum phase estimation (QPE), VQE trades deep coherent circuits for repeated state preparation, measurement, and classical optimization, making it more compatible with limited qubit counts and finite coherence times. Recent developments have focused on reducing quantum resource requirements while retaining chemically meaningful wavefunction structure. In this paper, we examine recent progress in VQE methods for molecular electronic structure with an emphasis on three themes: (i) strategies for circuit and ansatz complexity reduction, including adaptive and selectively screened approaches, (ii) chemically motivated workflows that combine VQE with orbital optimization, fragmentation, and localized active-space ideas to better address strong correlation, and (iii) extensions of VQE to excited-state calculations. Throughout, we emphasize the tradeoffs among parameter count, gate depth, symmetry preservation, measurement overhead, and classical preprocessing, and discuss where these approaches may become most useful for chemically challenging active spaces. We also highlight benchmarking considerations for assessing both accuracy and resource requirements, and conclude with a perspective on regimes in which VQE may offer the greatest long-term value, particularly multireference active spaces and low-lying excited-state manifolds.
Hybrid artificial intelligence–quantum (AI–Q) models arise at the intersection of two rapidly advancing computational paradigms, promising unprecedented capabilities for real-time molecular structure prediction. In classical computational chemistry, the accurate determination of ground-state energies and optimized geometries relies on ab initio methods such as density functional theory (DFT) and coupled-cluster approaches, which, while highly precise, exhibit steep polynomial or exponential scaling with system size. Conversely, deep neural networks (DNNs) have demonstrated remarkable success in learning potential energy surfaces (PES) from large datasets, achieving rapid inference but sometimes lacking the ultimate chemical accuracy required for predictive applications in drug discovery or materials design. On the other hand, variational quantum eigensolvers (VQEs) leverage the intrinsic parallelism of quantum hardware to approximate electronic structure problems, yet they remain constrained by qubit coherence times, gate fidelities, and circuit depth limitations inherent to noisy intermediate-scale quantum (NISQ) devices.
Quantum computers promise scalable treatments of electronic structure, yet applying variational quantum eigensolvers (VQE) on realistic drug-like molecules remains constrained by the performance limitations of near-term quantum hardwares. A key strategy for addressing this challenge which effectively leverages current Noisy Intermediate-Scale Quantum (NISQ) hardwares yet remains under-benchmarked is active space selection. We introduce a benchmark that heuristically proposes criteria based on chemically grounded metrics to classify the suitability of a molecule for using quantum computing and then quantifies the impact of active space choices across the VQE pipeline for quantum drug discovery. The suite covers several representative drug-like molecules (e.g., lovastatin, oseltamivir, morphine) and uses chemically motivated active spaces. Our VQE evaluations employ both simulation and quantum processing unit (QPU) execution using unitary coupled-cluster with singles and doubles (UCCSD) and hardware-efficient ansatz (HEA). We adopt a more comprehensive evaluation, including chemistry metrics and architecture-centric metrics. For accuracy, we compare them with classical quantum chemistry methods. This work establishes the first systematic benchmark for active space driven VQE and lays the groundwork for future hardware-algorithm co-design studies in quantum drug discovery.
Quantum computing has emerged as a transformative approach for tackling complex problems in quantum chemistry, particularly in simulating multielectron systems and electron-phonon interactions. However, the current noisy intermediate-scale quantum (NISQ) devices face significant challenges in implementing practical quantum algorithms due to error accumulation caused by increased circuit depth, qubit counts, and gate operations. To address these challenges, we present TenCirChem, an open-source Python package specifically designed for implementing variational quantum algorithms in quantum computational chemistry. TenCirChem demonstrates exceptional performance in simulating unitary coupled-cluster circuits through its innovative use of compact representations for quantum states and excitation operators. This package supports noisy circuit simulation and provides advanced algorithms for variational quantum dynamics, enabling researchers to explore complex chemical phenomena. Its capabilities are exemplified in various applications, including the calculation of potential energy curves and the investigation of quantum gate error impacts on molecular systems. Moreover, TenCirChem’s seamless integration with real quantum hardware makes it a versatile tool for both simulation and experimentation. A key innovation developed within the TenCirChem framework is the Clifford-based Hamiltonian engineering approach for molecules (CHEM). This algorithm addresses the critical challenge of achieving chemical accuracy with shallow quantum circuits, a fundamental requirement for practical applications on NISQ devices. CHEM employs a sophisticated Clifford-based Hamiltonian transformation that operates within the variational quantum eigensolver (VQE) framework using hardware-efficient ansatz. The method ensures four crucial advantages: (1) generation of initial circuit parameters corresponding to Hartree-Fock energy, (2) maximization of initial energy gradients with respect to circuit parameters, (3) minimal classical processing overhead without additional quantum resource requirements, and (4) compatibility with any circuit topology. Through quantum hardware emulator demonstrations, CHEM has achieved chemical accuracy for systems up to 12 qubits with fewer than 30 two-qubit gates, representing a significant advancement in practical quantum computational chemistry. To enhance the efficiency of variational quantum algorithms, we developed the sequential optimization with approximate parabola (SOAP) method, specifically designed for parameter optimization in unitary coupled-cluster ansatz. SOAP addresses the critical bottleneck of measurement requirements in VQE by implementing an innovative optimization strategy that approximates the energy landscape as quadratic functions. This approach minimizes the number of energy evaluations while incorporating parameter correlations through the integration of average directions from previous iterations. Benchmark studies demonstrate SOAP’s superior performance, showing faster convergence and enhanced noise robustness compared to traditional optimization methods. The method’s scalability has been validated through numerical simulations of up to 20 qubits, and its practical efficacy has been confirmed through experiments on superconducting quantum computers. For simulating electron-phonon systems, we introduce a variational basis state encoding algorithm that significantly reduces resource requirements compared to conventional unary and binary encoding schemes. Our approach achieves smaller scaling than traditional methods for qubits and gates for systems obeying the area law of entanglement entropy, this remarkable reduction in resource requirements comes at the cost of a constant amount of additional measurements. The algorithm’s effectiveness has been validated through both numerical simulations and quantum hardware experiments, demonstrating that using just one or two qubits per phonon mode can produce quantitatively accurate results across various coupling regimes. The integration of these innovations within the TenCirChem library represents a significant advancement in quantum computational chemistry. The software package provides researchers with a comprehensive toolkit for developing, testing, and implementing quantum algorithms, while the novel methods address fundamental challenges in circuit depth, parameter optimization, and resource efficiency. These developments collectively enhance the practicality of quantum computing for addressing real-world chemical problems in the NISQ era, offering improved accuracy, efficiency, and noise robustness.