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arXiv:2109.06803 · Journal of Physics B Atomic Molecular and Optical Physics

Noise-induced coherence in molecular processes

Amro Dodin, Paul W. Brumer

Published Nov 17, 2021• 18 citations
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Abstract

Abstract Excitation of molecules by incident incoherent electromagnetic radiation, such as sunlight, is described in detail and contrasted with the effect of coherent (e.g. laser) light. The nature of the quantum coherences induced by the former, relevant to transport processes in nature and in technology, is emphasized. Both equilibrium and steady state scenarios are discussed, three examples: simple models, calcium excitation in polarized light, and the isomerization of retinal in rhodopsin are used to expose the underlying qualitative nature of the established coherences.

DOI
10.1088/1361-6455/ac3e77

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Abstract Excitation of molecules by incident incoherent electromagnetic radiation, such as sunlight, is described in detail and contrasted with the effect of coherent (e.g. laser) light. The nature of the quantum coherences induced by the former, relevant to transport processes in nature and in technology, is emphasized. Both equilibrium and steady state scenarios are discussed, three examples: simple models, calcium excitation in polarized light, and the isomerization of retinal in rhodopsin are used to expose the underlying qualitative nature of the established coherences.
Dynamics and coherences in retinal isomerization are investigated in a standard two-mode two-state model irradiated by natural incoherent light using the Markovian partial-secular Bloch-Redfield formalism. The two-mode two-state model is a minimal model of retinal that considers vibronic states on a ground and excited electronic manifold coupled to two continuous Ohmic harmonic baths. All light-induced coherent oscillations are shown to disappear as the turn-on time becomes realistically slow. Rather, an interplay between incoherent-light induced coherences and environmentally induced coherences is exposed as the system approaches a nonequilibrium steady state. The dynamics of the system reveal stable steady state coherences under realistic conditions, producing a small but robust transient enhancement of quantum yield.
We investigate quantum coherences between excited states induced on quantum systems upon excitation by partially coherent radiation sources. Attempts at rejuvenating coherences using noisy sources are also explored. This work is most relevant to studies of photo-excitation of light harvesting systems under natural conditions as well as to quantum optical experiments using partially coherent lasers. The transient coherent response of a model VVV system upon irradiation by various models of incoherent light is explored and it was found that it was possible to induce transient excited state coherences upon excitation. These excited state coherences eventually become a small fraction of population and the system reaches a mixed state. Lastly, we critique an existing literature model of excitation by noisy laser and we show that the coherence observed in that scenario is artificial. We propose an alternative using a physical model of noisy excitation.
Photoinduced biological processes occur via one photon absorption in natural light, which is weak, CW and incoherent, but are often studied in the laboratory using pulsed coherent light. Here we compare the response of a molecule to these two very different sources within a quantized radiation field picture. The latter is shown to induce coherent time evolution in the molecule, whereas the former does not. As a result, the coherent time dependence observed in the laboratory experiments will not be relevant to the natural biological process. Emphasis is placed on resolving confusions regarding this issue that are shown to arise from aspects of quantum measurement and from a lack of appreciation of the proper description of the absorbed photon.
Under natural conditions, excitation of biological molecules, which display nonunitary open system dynamics, occurs via incoherent processes such as temperature changes or irradiation by sunlight or moonlight. The dynamics of such processes is explored analytically in a non-Markovian generic model. Specifically, a system S in equilibrium with a thermal bath TB is subjected to an external incoherent perturbation BB (such as sunlight) or another thermal bath TB${}^{\ensuremath{'}}$, which induces time evolution in (S+TB\text{S}+\text{TB}S+TB). Particular focus is on (i) the extent to which the resultant dynamics is coherent, and (ii) the role of ``stationary coherences'' established in the (S+TB\text{S}+\text{TB}S+TB) equilibration in response to the second incoherent perturbation. Results for systems with parameters analogous to those in light-harvesting molecules in photosynthesis show that the resultant dynamical behavior is incoherent beyond a very short response to the turn on of the perturbation.
One of the most pertinent problems in the debate on non-trivial quantum effects in biology concerns natural photosynthesis. Since sunlight is composed of thermal photons, it was argued to be unable to induce quantum coherence in matter, and that quantum mechanics is therefore irrelevant for the dynamical processes following photoabsorption. Our present analysis of a toy 'molecular aggregate'—composed of two dipole–dipole interacting two-level atoms treated as an open quantum system—however shows that incoherent excitations indeed can trigger persistent, coherent dynamics in both the site and the exciton bases: we demonstrate that collective decay processes induced by the dipole–dipole interactions create coherent intermolecular transport—regardless of the coherence properties of the incoming radiation. Our analysis shows that the steady state coherence is mediated by the population imbalance between the molecules and, therefore, increases with the energy difference between the two-level atoms. Our results establish the importance of collective decay processes in the study of ultrafast photophysics, and especially their potential role to generate stationary coherence in incoherently driven quantum transport.
The excitation of molecular systems by incoherent light is studied primarily using a V-system model in the Partial Secular Bloch-Redfield formalism. First, the dynamical regimes are characterized for a system irradiated by suddenly turned on light and the relevant timescales are defined in terms of system parameters. Then excitation by slowly turned-on light is studied, showing a decay in the magnitude of noise-induced coherences with increasing turn-on times, leading to their disapearance in the very slow turn-on limit relevant to many natural systems.