As we begin to reach the limits of classical computing, quantum computing has emerged as a technology that has captured the imagination of the scientific world. While for many years, the ability to execute quantum algorithms was only a theoretical possibility, recent advances in hardware mean that quantum computing devices now exist that can carry out quantum computation on a limited scale. Thus, it is now a real possibility, and of central importance at this time, to assess the potential impact of quantum computers on real problems of interest. One of the earliest and most compelling applications for quantum computers is Feynman's idea of simulating quantum systems with many degrees of freedom. Such systems are found across chemistry, physics, and materials science. The particular way in which quantum computing extends classical computing means that one cannot expect arbitrary simulations to be sped up by a quantum computer, thus one must carefully identify areas where quantum advantage may be achieved. In this review, we briefly describe central problems in chemistry and materials science, in areas of electronic structure, quantum statistical mechanics, and quantum dynamics that are of potential interest for solution on a quantum computer. We then take a detailed snapshot of current progress in quantum algorithms for ground-state, dynamics, and thermal-state simulation and analyze their strengths and weaknesses for future developments.
Abstract Quantum computers can in principle solve certain problems exponentially more quickly than their classical counterparts. We have not yet reached the advent of useful quantum computation, but when we do, it will affect nearly all scientific disciplines. In this review, we examine how current quantum algorithms could revolutionize computational biology and bioinformatics. There are potential benefits across the entire field, from the ability to process vast amounts of information and run machine learning algorithms far more efficiently, to algorithms for quantum simulation that are poised to improve computational calculations in drug discovery, to quantum algorithms for optimization that may advance fields from protein structure prediction to network analysis. However, these exciting prospects are susceptible to “hype,” and it is also important to recognize the caveats and challenges in this new technology. Our aim is to introduce the promise and limitations of emerging quantum computing technologies in the areas of computational molecular biology and bioinformatics. This article is categorized under: Structure and Mechanism > Computational Biochemistry and Biophysics Data Science > Computer Algorithms and Programming Electronic Structure Theory > Ab Initio Electronic Structure Methods
Computational quantum chemistry is a theoretical approach that utilizes the principles of quantum mechanics to perform computations on the electronic structure of molecules and atoms. This method enables the prediction of properties such as molecular structure, energy, electron orbitals, and electron density. In the field of the first principles, or ab initio, which relies solely on computation and not on experimental data, mathematical understanding allows even those without a background in chemistry to perform molecular orbital computations. The computation of quantum chemistry is computationally intensive, making them highly applicable in the field of high-performance computing. However, initiating quantum chemistry can be challenging for newcomers due to the numerous specialized terms and complex equations from quantum mechanics and chemistry. Therefore, this paper aims to provide a clear and accessible compilation of the fundamental and essential algorithm of the Hartree- Fock method, from theory to implementation. The goal is to offer the minimum required knowledge, in an approachable manner, serving as a starting point for those interested in computational quantum chemistry.
ABSTRACT Solving quantum molecular systems presents a significant challenge for classical computation. The advent of early fault‐tolerant quantum computing devices offers a promising avenue to address these challenges, leveraging advanced quantum algorithms with reduced hardware requirements. This review surveys the latest developments in quantum computing algorithms for quantum molecular systems in the fault‐tolerant quantum computing era, covering encoding schemes, advanced Hamiltonian simulation techniques, and ground‐state energy estimation methods. We highlight recent progress in overcoming practical barriers, such as reducing circuit depth and minimizing the use of ancillary qubits. Special attention is given to the potential quantum advantages achievable through these algorithms, as well as the limitations imposed by dequantization and classical simulation techniques. The review concludes with a discussion of future directions, emphasizing the need for optimized algorithms and experimental validation to bridge the gap between theoretical developments and practical implementation for quantum molecular systems.
Quantum chemistry models atoms and molecules using quantum mechanics, with the electronic structure problem at its core. This problem, which determines the energy and properties of electrons in a molecule, is exponentially hard to solve exactly on classical computers. To approximate solutions, effective models introduce layers of simplifications. However, these approximations can fail for strongly correlated systems, necessitating alternative approaches. Quantum computers, capable of processing quantum information natively, offer a promising path to simulate molecular systems beyond classical reach, with potential applications in catalysis, materials science, and photochemistry. Despite rapid advancements in quantum hardware, practical quantum computations remain challenging due to limited resources. This thesis optimizes quantum resource usage in computational chemistry, introducing novel embedding techniques and exploring applications beyond ground-state energies. Chapter 1 establishes the foundation by reviewing quantum chemistry methods, from Hartree-Fock and Density Functional Theory (DFT) to active space approaches. It also provides an introduction to quantum computing for chemistry, focusing on near-term algorithms. The following chapters present novel methods aimed at reducing quantum resource requirements and tackling problems classical methods struggle with. Chapter 2 introduces a technique to reduce the
λ-norm of the electronic structure Hamiltonian, a key measure of quantum resource demand. By transforming molecular orbitals, this method enhances sampling efficiency in Noisy Intermediate-Scale Quantum (NISQ) algorithms and reduces runtime in Fault-Tolerant Quantum Computing (FTQC). Localized orbitals outperform canonical ones, and an orbital-optimization scheme is proposed to minimize the
λ-norm. Benchmarks on hydrogen chains, FeMoco, and Ruthenium complexes demonstrate its effectiveness. Chapter 3 presents the FragPT2 framework for simulating large systems with multiple interacting fragments. This method embeds each fragment in the mean field of others and applies multi-reference perturbation theory to capture inter-fragment correlations such as dispersion and charge transfer efficiently. The approach reduces computational overhead and enables scalable simulations, as shown in applications to \ce{N2} dimers, aromatic dimers, and butadiene. Chapter 4 focuses on photochemical systems, where multiple electronic states must be treated equally. The state-averaged orbital-optimized variational quantum eigensolver (SAOOVQE) is extended with analytical energy gradients and non-adiabatic couplings, enabling geometry optimizations and simulations of non-adiabatic dynamics on quantum hardware. This is demonstrated by locating the conical intersection in formaldimine, highlighting SAOOVQE’s potential for studying photoisomerization in biomolecules. Building on this, Chapter 5 develops a quantum algorithm to detect conical intersections, where the Born-Oppenheimer approximation breaks down. These intersections are characterized by a discrete Berry phase (0 or
π), representing their topological nature. The algorithm extracts this phase as a single bit of information, ensuring resilience to noise. Analytical proof and numerical validation using a toy molecular model illustrate its effectiveness for studying light-perception biochemistry and related photochemical processes. Finally, Chapter 6 explores machine learning density functionals trained on noisy quantum data. While DFT is computationally efficient, its accuracy depends on approximated exchange-correlation functionals. This work proposes a neural network-based approach to learn the exact functional from quantum data, showing that training on noisy outputs from NISQ devices can mitigate sampling errors. Applications to the Fermi-Hubbard model and other systems demonstrate its potential to generalize and provide accurate results under noise. This thesis advances quantum computational chemistry by optimizing quantum resource usage, developing new embedding strategies, and expanding the scope of quantum simulations beyond ground-state properties. These contributions pave the way for practical quantum algorithms that could revolutionize molecular simulations in the near future.
Computer simulation is central to understanding the behaviour of matter. Yet, more than a century after the development of quantum theory, first-principles simulation of chemistry remains a daunting challenge, owing to the exponential growth in memory required to represent interacting quantum particles such as electrons in molecules. Quantum computing offers, in principle, a fundamentally more efficient paradigm for simulating quantum systems, with quantum chemistry often cited as a flagship application. However, many quantum algorithms face intrinsic limitations, and any genuine quantum advantage must surpass the strong baseline set by decades of progress in classical algorithms and hardware. While classical methods often suffice for simulating weakly correlated systems, systems with many strongly correlated electrons remain a challenge for both classical and quantum approaches. In this thesis, we develop quantum algorithms for solving the time-independent Schrödinger equation, with a focus on molecular systems with strongly correlated electrons. We introduce a framework for identifying a compact set of states that parametrise the many-body wavefunction by capturing the correlation due to spin coupling between localised electrons. This representation requires very few variational parameters but incurs a very high memory cost on classical computers. To overcome this, we design quantum circuits that efficiently prepare such states by exploiting their symmetry, encoding the dominant entanglement structure of electronic wavefunctions into the initial qubit states. Through theoretical analysis and classical simulations of quantum computers, we show that this substantially reduces the quantum resources required to accurately compute ground- and excitedstate properties. Finally, we develop an approach for approximating the optimal ansatz within the variational quantum eigensolver, an algorithm designed for near-term quantum devices. Our method constructs wavefunctions from products of symmetrypreserving unitary operators and couples discrete and continuous optimisation to yield highly compact representations of strongly correlated electrons using shallow quantum circuits. Together, these results establish complementary directions for embedding problemspecific structure into quantum simulation algorithms, advancing the practical simulation of strongly correlated electrons.