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arXiv:2006.12493 · Biosystems

An investigation into the energy transfer efficiency of a two-pigment photosynthetic system using a macroscopic quantum model

Fatemeh Ghasemi, Afshin Shafiee

Published Jul 27, 2020• 6 citations
arXivHTMLPDF
DOI
10.1016/j.biosystems.2020.104209

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Time-resolved role of coherence and delocalization in photosynthetic energy transfer from an extended exciton model

Jingyu Liu, Tao-Yuan Du

Photosynthetic antenna complexes achieve high quantum efficiency through exciton transport in coupled pigment networks. Conventional Frenkel-exciton models treat each chromophore as a structureless site and neglect internal electronic degrees of freedom that can influence coherence and delocalization. Here we develop an extended excitonic network model that preserves the pigment-pigment coupling topology while introducing tunable intrachromophoric electronic mixing within the single-excitation manifold. Using a Lindblad open-quantum-system framework, we quantify coherence, delocalization, and trapping efficiency across parameter space. We show that intrachromophoric mixing plays a time-dependent role: enhanced mixing on the antenna side promotes short-time coherent delocalization and improves excitation injection, whereas excessive mixing near the trapping site induces persistent delocalization and suppresses transfer efficiency. Simulated two-dimensional electronic spectra reveal enhanced cross peaks and systematic blue shifts, providing spectroscopic signatures of coherence-modulated transport. These results establish a microscopic connection between internal electronic structure and quantum transport performance in excitonic networks.

physics.opticsCross-listedarXiv:2603.29132•Apr 1, 2026

Quantum Resources for Efficient Excitation Energy Transfer in Natural and Artificial Pigment-Protein Molecular Aggregates

Charlotta Bengtson

Recently, long-lasting quantum effects in a number of photosynthetic complexes, which are pigment-protein molecular aggregates (PPMAs), were experimentally verified. These findings created an interest in trying to connect the known highly efficient excitation energy transfer (EET) in these systems to the existence of quantum effects such as quantum coherence and quantum correlations. It also raised the question of how these sensitive quantum effects can survive in such a macroscopic system. This thesis explores the existence and possible role of quantum effects in the EET in PPMAs. These systems can be modeled as non-Markovian open quantum systems and quantum effects can be investigated and quantified by methods developed in quantum information theory. Firstly, it is found that quantum nonlocal correlations in the EET in the Fenna-Matthews-Olson complex - a PPMA found in nature - are unlikely to exist when the initial excitation occurs in a natural manner. When the initial excitation occurs in an artificial manner by localization of the excitation on one pigment, nonlocal correlations exist on a short time scale. It is further found that in order for nonlocal correlations to be preserved in such a system, the excitation must be trapped on two pigments at the time and these pigments must not interact strongly with other pigments in the complex. Secondly, it is shown that quantum coherence is not in general a resource for efficient EET in model systems consisting of a network of pigments; systems optimized with respect to the amount of coherence do not coincide with systems with optimal EET efficiency between two end-site pigments. Thirdly, it is found that environmental effects and system-environment interactions can be tuned to optimize the EET efficiency in model PPMAs. The features of optimal environments highly depends on the structure of the pigment system and in particular, the relationship between the pigments excitation energies. It is further shown that a non-Markovian dynamics cannot be connected to an increased EET efficiency in these systems.

•Jan 1, 2018•0 citations
Photosynthetic antenna complexes achieve high quantum efficiency through exciton transport in coupled pigment networks. Conventional Frenkel-exciton models treat each chromophore as a structureless site and neglect internal electronic degrees of freedom that can influence coherence and delocalization. Here we develop an extended excitonic network model that preserves the pigment-pigment coupling topology while introducing tunable intrachromophoric electronic mixing within the single-excitation manifold. Using a Lindblad open-quantum-system framework, we quantify coherence, delocalization, and trapping efficiency across parameter space. We show that intrachromophoric mixing plays a time-dependent role: enhanced mixing on the antenna side promotes short-time coherent delocalization and improves excitation injection, whereas excessive mixing near the trapping site induces persistent delocalization and suppresses transfer efficiency. Simulated two-dimensional electronic spectra reveal enhanced cross peaks and systematic blue shifts, providing spectroscopic signatures of coherence-modulated transport. These results establish a microscopic connection between internal electronic structure and quantum transport performance in excitonic networks.
Recently, long-lasting quantum effects in a number of photosynthetic complexes, which are pigment-protein molecular aggregates (PPMAs), were experimentally verified. These findings created an interest in trying to connect the known highly efficient excitation energy transfer (EET) in these systems to the existence of quantum effects such as quantum coherence and quantum correlations. It also raised the question of how these sensitive quantum effects can survive in such a macroscopic system. This thesis explores the existence and possible role of quantum effects in the EET in PPMAs. These systems can be modeled as non-Markovian open quantum systems and quantum effects can be investigated and quantified by methods developed in quantum information theory. Firstly, it is found that quantum nonlocal correlations in the EET in the Fenna-Matthews-Olson complex - a PPMA found in nature - are unlikely to exist when the initial excitation occurs in a natural manner. When the initial excitation occurs in an artificial manner by localization of the excitation on one pigment, nonlocal correlations exist on a short time scale. It is further found that in order for nonlocal correlations to be preserved in such a system, the excitation must be trapped on two pigments at the time and these pigments must not interact strongly with other pigments in the complex. Secondly, it is shown that quantum coherence is not in general a resource for efficient EET in model systems consisting of a network of pigments; systems optimized with respect to the amount of coherence do not coincide with systems with optimal EET efficiency between two end-site pigments. Thirdly, it is found that environmental effects and system-environment interactions can be tuned to optimize the EET efficiency in model PPMAs. The features of optimal environments highly depends on the structure of the pigment system and in particular, the relationship between the pigments excitation energies. It is further shown that a non-Markovian dynamics cannot be connected to an increased EET efficiency in these systems.