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arXiv:1511.00057

Formalized Quantum Stochastic Processes and Hidden Quantum Models with Applications to Neuron Ion Channel Kinetics

Alan Paris, George Atia, Azadeh Vosoughi, Berman, Stephen

Published Oct 31, 2015• 1 citation
arXivHTMLPDF

Abstract

A new class of formal latent-variable stochastic processes called hidden quantum models (HQM's) is defined in order to clarify the theoretical foundations of ion channel signal processing. HQM's are based on quantum stochastic processes which formalize time-dependent observation. They allow the calculation of autocovariance functions which are essential for frequency-domain signal processing. HQM's based on a particular type of observation protocol called independent activated measurements are shown to to be distributionally equivalent to hidden Markov models yet without an underlying physical Markov process. Since the formal Markov processes are non-physical, the theory of activated measurement allows merging energy-based Eyring rate theories of ion channel behavior with the more common phenomenological Markov kinetic schemes to form energy-modulated quantum channels. Using the simplest quantum channel model consistent with neuronal membrane voltage-clamp experiments, activation eigenenergies are calculated for the Hodgkin-Huxley K+ and Na+ ion channels. It is also shown that maximizing entropy under constrained activation energy yields noise spectral densities approximating $S(f) \sim 1/f^α$, thus offering a biophysical explanation for the ubiquitous $1/f$-type in neurological signals.

DOI
10.48550/arxiv.1511.00057

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A new class of formal latent-variable stochastic processes called hidden quantum models (HQM's) is defined in order to clarify the theoretical foundations of ion channel signal processing. HQM's are based on quantum stochastic processes which formalize time-dependent observation. They allow the calculation of autocovariance functions which are essential for frequency-domain signal processing. HQM's based on a particular type of observation protocol called independent activated measurements are shown to to be distributionally equivalent to hidden Markov models yet without an underlying physical Markov process. Since the formal Markov processes are non-physical, the theory of activated measurement allows merging energy-based Eyring rate theories of ion channel behavior with the more common phenomenological Markov kinetic schemes to form energy-modulated quantum channels. Using the simplest quantum channel model consistent with neuronal membrane voltage-clamp experiments, activation eigenenergies are calculated for the Hodgkin-Huxley K+ and Na+ ion channels. It is also shown that maximizing entropy under constrained activation energy yields noise spectral densities approximating S(f)∼1/fαS(f) \sim 1/f^αS(f)∼1/fα, thus offering a biophysical explanation for the ubiquitous 1/f1/f1/f-type in neurological signals.
With an increasing amount of experimental evidence pouring in from neurobiological investigations, it is quite appropriate to study viable reductionist models which may explain some of the features of brain activities. It is now quite well known that the Hodgkin-Huxley (HH) Model has been quite successful in explaining the neural phenomena. The idea of circuit equivalents and the membrane voltages corresponding to neurons have been remarkable which is essentially a classical result. In view of some recent results which show that quantum mechanics may be important at suitable length scales inside the brain, the question which becomes quite important is to find out a proper quantum analogue of the HH scheme which will reduce to the well known HH model in a suitable limit. From the ideas of neuro-manifold and the relevance of quantum mechanics at some length scales in the ion channels, we investigate this situation in this paper by taking into consideration the Schrödinger equation in an arbitrary manifold with a metric, which is in some sense a special case of the heat kernel equation. The next important approach we have taken in order to bring about it's relevance in brain studies and to make connection with HH models is to find out a plausible circuit equivalents of it. What we do realize is that for a proper quantum mechanical description and it's circuit implementation of the same we need to incorporate the non commutativity inside the circuit model. It has been realized here that the metric is a dynamical entity governing space time and for considering equivalent circuits it plays a very distinct role. We have used the methods of stochastic quantization and have constructed a specific case here and see that HH model inductances gets renormalized in the quantum limit.
Understanding neural excitability and action potential generation is a cornerstone of neuroscience, relying on the complex interplay of biophysical mechanisms governed by ion channels in neuronal membranes. Traditional approaches, such as the Hodgkin-Huxley model, have provided a robust framework for simulating these processes using classical computational techniques. However, the advent of quantum computing opens new avenues for exploring neuronal dynamics, particularly due to ion movement's inherently quantum mechanical properties at atomic scales. In this study, I investigated the intersection of quantum computing and membrane biophysics, evaluating how quantum algorithms could revolutionize simulations of ion channel behavior and neuronal signaling. I began by analyzing the limitations of classical methods in handling high-dimensional, nonlinear systems. Next, I introduced key quantum computing principles, including qubits, superposition, and entanglement, and their potential applications in solving molecular dynamics and differential equations relevant to neuronal activity. Despite promising theoretical advantages, practical challenges such as qubit coherence, error rates, and hardware scalability must be addressed before quantum models can outperform classical simulations. I also discussed hybrid classical-quantum approaches as a transitional strategy, leveraging the strengths of both paradigms. By bridging neuroscience, biophysics, and quantum information science, I aimed to stimulate interdisciplinary research toward more efficient and accurate models of neural excitability.
It is known that the opening or closing mechanism of a voltage-gated ion channel is triggered by the potential difference across the cell membrane in the nervous system. Based on this picture, we model the ion channel as a nanoscale two-terminal ionic tunneling junction. We apply an external time-varying voltage on the junction to mimic the membrane potential difference in the stimulation of neurons. We derive the non-Markovian quantum Langevin equation from the first principle of quantum mechanics for the ion transport in ion channels, and obtain the ion transport current in terms of quantum tunnelings of ions controlled by the time-varying voltage. We find that the time-varying voltage induces an effective magnetic flux, which causes quantum coherence in ion tunnelings. This effective magnetic flux induces further an oscillatory component to the spectral structure of the ion system, forming a time-dependent quantum memory. Such voltage-induced memory is defined as the active quantum memory, which manifests in the system with a regular oscillatory sideband structure in the ion transport current. The sideband structure demonstrates a multicrossing hysteresis in the current-voltage ( I − V ) curve, responding to the variation of the time-varying voltage (membrane potential difference). We also find that the strength of active quantum memory can be described by the ratio of amplitude and frequency of the time-varying voltage, and can be quantitatively measured through the number of nonzero cross points in the I − V hysteresis and conductance-voltage diagram. Additionally, we explore the temperature dependence of the active quantum memory in such a system. Further, we apply this model to the ion channel system on the biological energy scale. The description of these active quantum memory characteristics provides a quantum mechanical understanding to the underlying mechanism of ion channel dynamics.
Among several tasks in Machine Learning, is the problem of inferring the latent variables of a system and their causal relations with the observed behavior. A paradigmatic instance of such problem is the task of inferring the Hidden Markov Model underlying a given stochastic process. This is known as the positive realization problem (PRP) [Benvenuti,Farina(2004)] and constitutes a central problem in machine learning. The PRP and its solutions have far-reaching consequences in many areas of systems and control theory, and is nowadays an important piece in the broad field of positive systems theory [Luenberger(1979)]. We consider the scenario where the latent variables are quantum (e.g., quantum states of a finite-dimensional system), and the system dynamics is constrained only by physical transformations on the quantum system. The observable dynamics is then described by a quantum instrument, and the task is to determine which quantum instrument-if any-yields the process at hand by iterative application. We take as a starting point the theory of quasi-realizations, whence a description of the dynamics of the process is given in terms of linear maps on state vectors and probabilities are given by linear functionals on the state vectors. This description, despite its remarkable resemblance with the Hidden Markov Model, or the iterated quantum instrument, is however devoid from any stochastic or quantum mechanical interpretation, as said maps fail to satisfy any positivity conditions. The Completely-Positive realization problem then consists in determining whether an equivalent quantum mechanical description of the same process exists. We generalize some key results of stochastic realization theory, and show that the problem has deep connections with operator systems theory, giving possible insight to the lifting problem in quotient operator systems. Our results have potential applications in quantum machine learning, device-independent characterization and reverse-engineering of stochastic processes and quantum processors, and more generally, of dynamical processes with quantum memory [Guta(2011), Guta&Yamamoto(2013)].
Among several tasks in Machine Learning, a specially important one is the problem of inferring the latent variables of a system and their causal relations with the observed behavior. A paradigmatic instance of this is the task of inferring the hidden Markov model underlying a given stochastic process. This is known as the positive realization problem (PRP), [L. Benvenuti and L. Farina, IEEE Trans. Autom. Control 49(5), 651–664 (2004)] and constitutes a central problem in machine learning. The PRP and its solutions have far-reaching consequences in many areas of systems and control theory, and is nowadays an important piece in the broad field of positive systems theory. We consider the scenario where the latent variables are quantum (i.e., quantum states of a finite-dimensional system) and the system dynamics is constrained only by physical transformations on the quantum system. The observable dynamics is then described by a quantum instrument, and the task is to determine which quantum instrument — if any — yields the process at hand by iterative application. We take as a starting point the theory of quasi-realizations, whence a description of the dynamics of the process is given in terms of linear maps on state vectors and probabilities are given by linear functionals on the state vectors. This description, despite its remarkable resemblance with the hidden Markov model, or the iterated quantum instrument, is however devoid of any stochastic or quantum mechanical interpretation, as said maps fail to satisfy any positivity conditions. The completely positive realization problem then consists in determining whether an equivalent quantum mechanical description of the same process exists. We generalize some key results of stochastic realization theory, and show that the problem has deep connections with operator systems theory, giving possible insight to the lifting problem in quotient operator systems. Our results have potential applications in quantum machine learning, device-independent characterization and reverse-engineering of stochastic processes and quantum processors, and more generally, of dynamical processes with quantum memory [M. Guţă, Phys. Rev. A 83(6), 062324 (2011); M. Guţă and N. Yamamoto, e-print arXiv:1303.3771(2013)].
We present quantum mechanics (QM) as theory of special classical random signals. On one hand, this approach provides a possibility to go beyond conventional QM: to create a finer description of micro processes than given by the QM-formalism. In fact, we present a model with hidden variables of the wave-type. On the other hand, our approach establishes coupling between quantum and classical information theories. We recall that quantum information theory has already been used for description of the entropy of Gaussian input signals for noisy channels. The entropy of a classical random input was invented as the entropy of the quantum density operator corresponding to the covariance operator of the input process.1 In this paper, we proceed the other way around: we apply classical signal theory to create a measurement model which reproduces quantum probabilities.